Sphingobacterium spiritivorum: I6J01_03605
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Entry
I6J01_03605 CDS
T07566
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi01501
beta-Lactam resistance
sspi01503
Cationic antimicrobial peptide (CAMP) resistance
sspi02020
Two-component system
sspi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I6J01_03605
09132 Signal transduction
02020 Two-component system
I6J01_03605
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6J01_03605
01503 Cationic antimicrobial peptide (CAMP) resistance
I6J01_03605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspi02000
]
I6J01_03605
02044 Secretion system [BR:
sspi02044
]
I6J01_03605
01504 Antimicrobial resistance genes [BR:
sspi01504
]
I6J01_03605
Transporters [BR:
sspi02000
]
Other transporters
Pores ion channels [TC:
1
]
I6J01_03605
Secretion system [BR:
sspi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
I6J01_03605
RTX toxin transporter
I6J01_03605
Multiple protein transporter
I6J01_03605
RaxAB-RaxC type I secretion system protein
I6J01_03605
Antimicrobial resistance genes [BR:
sspi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
I6J01_03605
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
I6J01_03605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QQT36526
LinkDB
All DBs
Position
890702..892042
Genome browser
AA seq
446 aa
AA seq
DB search
MFTFFRYILLTLTVTVVSQRILPAQQTFDLNQCIAIALEKNIAVDKAMLALDNKTLDIKN
YKNERLPNLNGFTNMFSNFGQSQDIFGNNARNDNFNSTLGLSSSYSILNNGKLKNSIKKS
EKEMEASGQDLALLKREITLKTIEGYLNVLLQKEICKAVDTALTFAEQQFQKVQKSTDLG
ATSLTILYEAKANYERENEKKRRAHYAVDKAILELKQIMAVEQNQNFEINTEFQALSSLE
ESSYDNAALYASFLQQHPALKKYALLNEALKFDQKAIKAQLYPTIDASLTLGSFYFSNLS
TGFGKLPLFNQLRNNFSQQIGLTINIPVFNKNAVKIAVQKNKIQQAENAKQLELEQLTIK
QDLEKQLLDLDNYQRQYKLAANVLEVTRKAFELSLKSYEAGRISIYDLSTSRSNLLTLES
ELIQTKYNALFTQIMVRYLSTGEIKP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtttacattttttcgatatatactactaacgcttacagtcacagtcgtttctcaaagg
attttgccggcacagcagacttttgacttaaatcaatgtattgctattgctcttgaaaaa
aacatcgctgtagataaagcgatgttggctctggacaacaaaactctggacataaaaaat
tacaaaaatgaaaggttgcccaatttaaacggatttacaaatatgttcagcaattttgga
caatcacaggatattttcgggaataatgcaagaaatgataattttaacagcacacttggt
ctctcttcatcctattcgatcctgaataacggtaaactgaaaaattccattaaaaaatca
gagaaagaaatggaagccagcggacaggatctggctttattgaaaagagaaataacgctg
aaaactatcgagggttacctgaatgtattgctgcaaaaagaaatctgtaaagctgtcgat
acagctttgacatttgctgagcaacagtttcagaaagtacagaagtccacagaccttggc
gcgacttcactgacgatattatatgaagcaaaggccaattatgaacgtgaaaacgaaaag
aaaagacgggcacactatgctgtagataaagcaatattggaactcaaacagatcatggct
gtggaacagaatcaaaattttgagattaatacagaatttcaggctttatcatccctagag
gaatcaagttatgacaatgcagctttgtatgcatcctttttgcagcaacatccggctttg
aaaaaatatgctttgttaaatgaagcactgaaatttgatcaaaaagctataaaagcgcaa
ctgtatcccaccatagatgcaagtctgacactgggaagtttttatttcagcaatctgtcc
acaggttttggtaaactacccttattcaatcagctccggaataatttttctcagcagata
ggtttaacaatcaacatacctgtattcaataagaatgcagtaaaaatagcggttcagaaa
aataagatacaacaggctgaaaatgctaagcaactggaattagagcaacttacaatcaaa
caggacctggaaaaacagttactggatctggataattaccaaagacaatataaattggca
gcaaatgttctggaagtaacccgaaaagcctttgagttaagcctgaaaagttatgaagca
ggaagaatcagtatatacgacctaagcacctcacggtcaaatctgctcacattggaaagt
gagcttatccagacaaaatacaatgctttatttacacaaatcatggttcggtatctgagt
acaggcgaaataaaaccttaa
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