Spongiibacter taiwanensis: NCG89_10470
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Entry
NCG89_10470 CDS
T08367
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
staw
Spongiibacter taiwanensis
Pathway
staw01501
beta-Lactam resistance
staw01503
Cationic antimicrobial peptide (CAMP) resistance
staw02020
Two-component system
staw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
staw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCG89_10470
09132 Signal transduction
02020 Two-component system
NCG89_10470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCG89_10470
01503 Cationic antimicrobial peptide (CAMP) resistance
NCG89_10470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
staw02000
]
NCG89_10470
02044 Secretion system [BR:
staw02044
]
NCG89_10470
01504 Antimicrobial resistance genes [BR:
staw01504
]
NCG89_10470
Transporters [BR:
staw02000
]
Other transporters
Pores ion channels [TC:
1
]
NCG89_10470
Secretion system [BR:
staw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NCG89_10470
RTX toxin transporter
NCG89_10470
Multiple protein transporter
NCG89_10470
RaxAB-RaxC type I secretion system protein
NCG89_10470
Antimicrobial resistance genes [BR:
staw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCG89_10470
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NCG89_10470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
USA41944
LinkDB
All DBs
Position
complement(2256205..2257638)
Genome browser
AA seq
477 aa
AA seq
DB search
MIAKRHPLYAAMLLVGLSGQVALADTLLDVYELALKNDPVLKQAEANYRANLETENIALS
GLLPQVVGQAYYEDAETDSERASTTITDDGMGGTTSSIIDQKASTDSETEAYSVSLTQPI
FDLPAWFTFKAGKAVSEQAKAQLAYDQQDLIVRVAEAYFNVLRAKENLDASKAEEKAANR
QLEQTQQRFDVGLIAITDVHEARAVYDGIVAQRLGFEGSLAIARENLSTLTGQEHHNLWS
LQDSFPIAMPEPSDRSEWVEFALANNYLLKAAGANRDSAYQNAQAKKMEHLPTVTGSFTY
SKQDLDGSTTFNPTSAFATPPDSYSETEALRVTLTVPLFAGGGISAARRQAFEQYNAAQQ
GSINILRQVIAGTRAQHIAVNTDVQTVKARKQNIISARSALDATEAGYEVGTRNIVDVLE
AQRNLYAAMRDYTNARYDYVLDVLRLKQNAGTLSPADINDLNTWLEAAGETTLSEQS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgaaacgtcatcccctctatgccgcaatgttgcttgtcggcctgtccggacaa
gtcgccttggccgacacgctgctggatgtctacgaactggcgctcaaaaacgaccccgta
ttgaaacaggccgaggccaactatcgggccaacctggaaacagagaatatcgccctctcc
ggcctgctgccccaggtggtcggccaggcctattacgaagacgccgagaccgacagtgag
cgggccagtaccaccatcaccgatgacggcatgggcggcaccacctccagcatcatcgac
caaaaggccagcaccgactccgaaaccgaggcctactccgtcagcctgacccaaccgatt
tttgatctgcccgcctggttcaccttcaaagccggtaaggcagtcagcgaacaagccaag
gcccaactcgcctacgatcaacaggacctgatcgttcgcgttgccgaggcctacttcaat
gtgctccgggccaaagaaaacctcgacgcctcaaaggccgaagaaaaagccgccaatcgt
cagctcgagcaaacccaacagcgcttcgacgtcggcctgatcgccatcactgacgttcac
gaagcccgggccgtttacgatggcattgtcgcccagcgcctcggctttgagggctcactg
gccattgcccgagaaaacctgagcaccctgactggccaggagcatcacaacctctggtcc
ctccaggacagcttccccattgccatgccagaacccagcgaccgcagcgagtgggtcgaa
ttcgccctggccaacaactacctgctaaaggccgctggcgccaaccgggattcggcctac
cagaacgcccaagccaaaaagatggagcacctgcccacggtgaccggcagctttacctac
agcaagcaggacctggacggcagcacaacctttaaccccaccagcgcctttgccacgccg
cctgacagctattccgaaaccgaggccctgcgcgtcaccctgactgtgccgctgtttgcc
ggcggcggtatcagcgccgcgcgcagacaagctttcgagcaatacaatgccgctcagcag
ggcagtattaacatcctgcgtcaggttatcgccggcacccgggcccagcacattgctgta
aataccgatgttcaaacagtaaaagcgcgcaagcagaacattatttccgccagaagcgca
ctggatgcgaccgaagccggttacgaagtgggaacgcgtaatattgtcgatgtgctggaa
gcacaacgcaacctgtatgccgccatgcgcgactacaccaatgcgcgctacgactacgtg
ctggacgtgcttcggctaaaacaaaatgcgggcaccctgagccccgctgacatcaacgac
ctcaacacttggctggaagcagcgggcgaaaccaccctgtcagaacaaagctag
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