Stenotrophomonas sp. SBJS02: FQS62_019135
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Entry
FQS62_019135 CDS
T10678
Symbol
smeF
Name
(GenBank) multidrug efflux RND transporter outer membrane subunit SmeF
KO
K18139
outer membrane protein, multidrug efflux system
Organism
stej Stenotrophomonas sp. SBJS02
Pathway
stej01501
beta-Lactam resistance
stej02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
stej00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FQS62_019135 (smeF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FQS62_019135 (smeF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stej02000
]
FQS62_019135 (smeF)
01504 Antimicrobial resistance genes [BR:
stej01504
]
FQS62_019135 (smeF)
Transporters [BR:
stej02000
]
Other transporters
Pores ion channels [TC:
1
]
FQS62_019135 (smeF)
Antimicrobial resistance genes [BR:
stej01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FQS62_019135 (smeF)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
FQS62_019135 (smeF)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
FQS62_019135 (smeF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5421
Motif
Other DBs
NCBI-ProteinID:
WAP01398
LinkDB
All DBs
Position
complement(4146821..4148221)
Genome browser
AA seq
466 aa
AA seq
DB search
MEVIPMKSTSLFLSITAALVLAGCSTLAPKNTAVAPAIPAQWPAEAAQGEVADVAAVGWR
DFFTDARLQQVIDQSLQNNRDLRVAVLNVERARGQYRVQRADRVPGVAVTGQMDRRGTDA
GVTEQFAAGVGVAEFELDLFGRVRNLSEAALQQYFAVAANRRNAQLSLVAETATAWLTYG
ADAQRLKIADATLKTYEDSLRLAEARHERGGSSALELTQTRTLVETARTDAARLRGQLAQ
DRNALALLAGGQLDPALLPDSIEPQLLALAPPPAGLPSDVLLQRPDIMAAEHQLLAANAN
IGAARAAFFPSISLTGSIGSGSSELSNLFDSGTRVWSFLPKITLPIFQGGKLRANLAIAN
ADRDIALAQYEKSIQVGFRETADALALNVSLDEQVSSQQRLVEAAEQANRLSQARYDAGL
DSFVTLLDARRTAYNAQQTQLQAQLAQQANRITLYKVLGGGWHERG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcattcccatgaaaagtacatccctgttcctttccattaccgcagcgctcgtg
ctcgccggctgctccaccctggcgccgaagaacaccgctgtcgctccggcaattccggcg
cagtggccggccgaggccgcgcagggcgaggtggccgatgtcgccgccgtcggctggcgc
gatttcttcaccgatgcgcgcctgcagcaggtgatcgaccagtcgctgcagaacaaccgc
gacctgcgtgtggccgtgctcaatgttgaacgcgcgcgcggccagtaccgcgtgcagcgc
gccgatcgcgtacccggcgtggccgtcaccggccagatggaccgccgtggtaccgacgcc
ggtgtcaccgagcagttcgccgccggtgtcggcgtggccgagttcgagctggatctgttc
ggccgcgtgcgcaatctcagtgaagcggcgctgcagcagtacttcgccgtggccgccaac
cgccgcaacgcgcagttgagcctggtggccgagaccgcgacggcgtggctgacctacggt
gccgacgcgcagcggctgaagatcgccgatgcaacgctgaagacctacgaggattcgttg
cgcctggccgaggcccgccacgagcgtggtggcagttcggcgttggaactcacccagacc
cgtaccctggtcgagaccgcacggacggatgcggcacgcctgcggggccagttggcccag
gaccgcaacgcgctggcgctgctggcgggtggccagctggatccggcactgctgccggac
agcatcgaaccgcagctgctggcgctggcaccgccgccggctggcctgcccagcgacgtg
ctgctgcagcgcccggacatcatggccgccgaacaccagctgctggccgccaacgccaac
atcggtgcggcacgcgcagcgttcttcccgagcatctcgctgaccggcagcatcggcagt
ggctcgagtgaactgtccaacctgttcgacagtggaacgcgggtgtggagtttcctgccg
aagatcacccttccgatcttccagggcggcaagctgcgcgccaacctggccatcgccaac
gccgatcgtgatatcgcactggcgcagtacgagaagtcgatccaggtgggcttccgcgaa
accgccgatgcgttggcattgaacgtcagcctggacgagcaggtgagttcacagcagcgc
ctggtggaagcggccgaacaggccaaccgcctgtcacaggcccgctacgacgcggggctg
gacagcttcgtcaccctgctcgatgcgcggcgtaccgcctacaacgcgcagcagacccag
ctgcaggcgcagctggcacagcaggccaaccgcatcaccctgtacaaggtgctgggcggc
ggctggcacgagcgcggctag
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