Sphingobacterium thalpophilum: NCTC11429_00142
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Entry
NCTC11429_00142 CDS
T06778
Name
(GenBank) outer membrane channel protein
KO
K12340
outer membrane protein
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha01501
beta-Lactam resistance
stha01503
Cationic antimicrobial peptide (CAMP) resistance
stha02020
Two-component system
stha03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC11429_00142
09132 Signal transduction
02020 Two-component system
NCTC11429_00142
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC11429_00142
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC11429_00142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stha02000
]
NCTC11429_00142
02044 Secretion system [BR:
stha02044
]
NCTC11429_00142
01504 Antimicrobial resistance genes [BR:
stha01504
]
NCTC11429_00142
Transporters [BR:
stha02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC11429_00142
Secretion system [BR:
stha02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NCTC11429_00142
RTX toxin transporter
NCTC11429_00142
Multiple protein transporter
NCTC11429_00142
RaxAB-RaxC type I secretion system protein
NCTC11429_00142
Antimicrobial resistance genes [BR:
stha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCTC11429_00142
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NCTC11429_00142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
VTR28187
UniProt:
A0A4U9U7N1
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All DBs
Position
1:179179..180729
Genome browser
AA seq
516 aa
AA seq
DB search
MKDKIIKPDKDFELAIQAKKSEQTSRHPDKEMDRAYVYRLSCAYSSPFMPMIDLSFAFDE
LKKLLKQWPAKRKKKPVTAPLLGILLLFFVQSVYAQHAEIIHPLSLEEIWKIAEANNRDL
KLSDLNVQQSKIEILEAKDHLLPEFSAGGDVKLNSKFLIYDNGLFSSPQDVPIKGYGYGV
GYNLNLNLFNGGKDKRNIVMKKEEGVRKLYEVELQKQSVKYHVAVAYFDLYKFLHFYDFL
DAETEAEKKQLTLIESLHKNGTVLKSDVLRTSVKLSQLELALSDVKKKIAIAKQHLNILM
GREIDTELAIKHADTIELNAITEGDYKDYVDIAFNKSPSYKMVNSDIKWSKLNVKQMKAT
LWPKVSLYSNYNYTYPQISFYPYSNDLWGFGQTGIKVQFSIDNLYKSKHSIARAQTVSNQ
AKEKAEMKKDEISLQVKEAYLQQQQALESVETAEQNIIKTTETLRVIRSSYLNQESLLTD
LLEAENALLEAKFNLTTAQTNVQVSHIRLLAIVGIL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaaatcataaaacctgataaagattttgaacttgcaatacaagccaaaaaa
tctgaacagacatcacgtcatccggataaagaaatggatagagcctacgtctatcggctg
tcctgtgcttattctagtccctttatgcccatgatagatttaagcttcgcttttgatgag
ctgaaaaagctgttaaaacaatggcccgcaaagagaaagaagaaaccagtcacagcccca
cttttgggcatactgttgctattttttgtacaatccgtgtatgctcagcatgcagaaatc
atccaccccctaagtttggaagaaatatggaaaatcgccgaagctaacaaccgggacctg
aaactatcggatctaaatgttcagcaaagtaaaatagaaatattggaagccaaagatcat
ttgctgccggaattttcagcaggtggcgatgtaaaactcaattccaaatttttgatctat
gacaacggattattctcatctccgcaggatgtacctataaaaggctatggatacggagtg
ggttacaacttaaaccttaacctcttcaatggcggtaaagacaaaagaaacatcgtcatg
aaaaaggaagaaggggtacgaaaactgtatgaagtggagctacaaaagcaaagcgtaaaa
taccatgtagcagttgcctatttcgatctgtataaatttctgcacttctatgattttctt
gacgccgaaactgaagcagagaaaaaacagctgacactgattgaaagcctgcataaaaac
ggtactgtgctaaaaagtgatgtactgagaacttccgtcaaattatcgcagctggagctg
gctctttccgatgtcaaaaaaaagattgcaatcgccaagcaacacctcaatatactgatg
ggccgtgaaattgataccgagctagcaataaaacatgcggatacaattgaattaaacgcc
atcacagaaggtgactacaaagattatgtagatatcgcttttaacaagtctccgtcatat
aaaatggtgaatagcgacatcaaatggagtaagctgaacgttaaacagatgaaagctacg
ctatggccaaaagtctctctgtattccaattacaattatacgtatccgcagatttccttt
tatccctattcgaatgatttatggggatttggtcagacaggaattaaagttcagttttcc
atcgataatctatacaagagcaagcattccattgctcgtgcccagactgtcagcaatcag
gcaaaggaaaaagcagaaatgaagaaggatgaaatctctcttcaggtaaaagaggcttat
ttacagcaacaacaggctttggagagcgtggaaacagctgagcaaaatatcattaaaacc
actgaaaccttacgtgttatcagaagcagctacttaaatcaggaatctcttctgaccgat
cttctggaggccgaaaatgctttattggaagctaaatttaatctgacaacagcacagaca
aacgtacaagtaagccatatcagattattggcaatagtaggaattctctaa
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