Sphingobacterium thalpophilum: NCTC11429_00677
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Entry
NCTC11429_00677 CDS
T06778
Symbol
ttgC
Name
(GenBank) Probable efflux pump outer membrane protein ttgC precursor
KO
K12340
outer membrane protein
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha01501
beta-Lactam resistance
stha01503
Cationic antimicrobial peptide (CAMP) resistance
stha02020
Two-component system
stha03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC11429_00677 (ttgC)
09132 Signal transduction
02020 Two-component system
NCTC11429_00677 (ttgC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC11429_00677 (ttgC)
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC11429_00677 (ttgC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stha02000
]
NCTC11429_00677 (ttgC)
02044 Secretion system [BR:
stha02044
]
NCTC11429_00677 (ttgC)
01504 Antimicrobial resistance genes [BR:
stha01504
]
NCTC11429_00677 (ttgC)
Transporters [BR:
stha02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC11429_00677 (ttgC)
Secretion system [BR:
stha02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NCTC11429_00677 (ttgC)
RTX toxin transporter
NCTC11429_00677 (ttgC)
Multiple protein transporter
NCTC11429_00677 (ttgC)
RaxAB-RaxC type I secretion system protein
NCTC11429_00677 (ttgC)
Antimicrobial resistance genes [BR:
stha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCTC11429_00677 (ttgC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NCTC11429_00677 (ttgC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
VTR30577
UniProt:
A0A4U9UDR4
LinkDB
All DBs
Position
1:complement(726726..728108)
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AA seq
460 aa
AA seq
DB search
MKRVYIYTTLCFLLSYGSAKAQQAEQGLSERETGTSIVTTGDNKQMTKRTLAECIQLAVK
ANPTLLQNELDVRRAEVNLAQAKANRLPDVNASLQHSLTSGRSQDNSTLQYISSNNSTGN
FSLGASLPLFRGFRLFNEIRMRADAKTAGKLTFDTQINALKLDVITAYIQSLTAQDILRQ
SEMQTEVTREQVRRAETMHKEGAINPGDYFDLKGQLANDVNMVENNRQLLYSSRVKLATL
LNMDENQLGELDNLRMQESGQRLDAKQLYEMAVAQLPDMQALDYQIKVAERNIKIAKSYY
YPSLSLSAGLGSNYSKLGIQGTYWSQMRNNVGKSISLNLSVPIFNHLQVYNNVRLAKLDL
QAAKYQKEIQANILRSATSNAVFNLQNASNMITQLRSQNENYAESFRIAKVVFELGNSNS
VIFLTAKNKYDSSQIQLLVKQYEWLLQKYINDYYAGSLNL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagtctatatatatactacgttatgttttttattgagttatggcagcgcaaaa
gcgcaacaggctgagcagggactatcagaaagagagaccgggacatcgatagtcacaacg
ggcgacaataaacaaatgaccaaacgaactttagctgaatgtatacaattagctgtaaaa
gccaatccaaccctattgcagaatgaactggatgtgaggcgtgcagaggtgaatttagca
caagctaaagcgaatagacttcccgatgtaaatgcaagtctacagcatagcctgacatct
ggaagatcgcaggataattctacccttcaatatatttcatccaacaattcgacagggaat
ttttccttgggtgcaagtcttccactatttagagggtttcgtctatttaacgaaattcgg
atgcgtgctgatgcaaagactgccggtaaattgacttttgatacgcagattaatgcttta
aaactggatgttattactgcttatatccaaagtttgactgctcaggatatattgagacaa
tccgaaatgcagactgaggtaacccgggaacaggttcgccgggcggagacgatgcataag
gaaggtgccatcaacccgggagactactttgatttgaaaggacaactggccaacgatgtt
aatatggttgagaataaccggcagttactctatagtagccgagtgaaactcgccaccttg
ctaaatatggatgaaaatcaattgggagaattggataacctaagaatgcaggaaagcggg
caacgactggatgcgaaacagctatatgaaatggctgttgctcaattgcccgatatgcag
gcgctggattatcagattaaagtggcggagcggaatattaagattgcgaaatcatattat
tatccatcgttgagtttgagcgctggtttaggctccaattattctaaattggggattcaa
gggacgtattggtcacaaatgcgtaataacgtcggaaagtctatttctttaaatctctct
gttcctatttttaatcatttacaggtttacaacaacgtccgtttagcgaagttagatcta
caagcagctaagtatcaaaaagagattcaggcaaatattttacggtctgccacatccaat
gctgtttttaatttgcagaacgccagtaacatgattacacaattacgtagtcaaaatgaa
aattatgcggaatctttccgcatagctaaagtcgtattcgaactgggaaacagtaattct
gttatctttcttacggccaaaaataaatacgacagtagtcagattcaattgcttgtgaag
caatatgaatggctgctgcaaaaatatatcaacgattattacgcaggctcgttaaattta
tag
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