Sphingobacterium thalpophilum: NCTC11429_05232
Help
Entry
NCTC11429_05232 CDS
T06778
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha01501
beta-Lactam resistance
stha01503
Cationic antimicrobial peptide (CAMP) resistance
stha02020
Two-component system
stha03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC11429_05232
09132 Signal transduction
02020 Two-component system
NCTC11429_05232
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC11429_05232
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC11429_05232
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stha02000
]
NCTC11429_05232
02044 Secretion system [BR:
stha02044
]
NCTC11429_05232
01504 Antimicrobial resistance genes [BR:
stha01504
]
NCTC11429_05232
Transporters [BR:
stha02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC11429_05232
Secretion system [BR:
stha02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NCTC11429_05232
RTX toxin transporter
NCTC11429_05232
Multiple protein transporter
NCTC11429_05232
RaxAB-RaxC type I secretion system protein
NCTC11429_05232
Antimicrobial resistance genes [BR:
stha01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCTC11429_05232
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NCTC11429_05232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
VTR55106
UniProt:
A0A4U9W8E4
LinkDB
All DBs
Position
1:complement(5892884..5894188)
Genome browser
AA seq
434 aa
AA seq
DB search
MDRLLNIFIFGFMILCCVKPVTVAAQTVTVTLKDCIRRGLDNNLQFQIEQLKVMRAEKGR
RSKASRFLPQISGSISHNYYFGSTIDPASNARIESNIQSDNFGLDGSINLFNFAELWEST
LQADDHIISLQSRSVIEREFQMNLIQTYYDALAAQEWKKVIEEQLRNSQEQVERISQEVA
EGAKSESDMYDIRVVYTEEKKILQQTIQDEENQKLALLQLMNDNVLKPDDMVLVHEEIVL
QQSRTNLSEHPKIRLEQTKRERLEHEYKQLLGPMLPKLTLSYSFGTFYSNKIKDVWDTSL
KFDNQLSNNKNQFLGLNLIVPLFSRGDRMRARKVKRIEMQEQQLILEKTRLDLDNRYEQE
QQKIRQYEGLYPVLYEHLEASKKSLQTTRTKFEFGRVDISAYKAAKNQVLSASYDLLKNH
LYKLMAIEMVNTMQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggatagactgttaaatatatttattttcggatttatgatcctgtgctgcgtaaagcct
gtaacggttgcagcacagacggttaccgtcacattgaaggactgcatccgccgcggattg
gataacaatctacaatttcaaatagagcaactgaaggtgatgcgtgccgagaaagggcgg
cgcagtaaagctagccgttttttaccgcagatttcaggaagtatatcgcacaactactat
tttggatccaccatcgatccggcatccaacgcccgtattgagtctaatatacagtctgac
aatttcggacttgacggatctatcaacctgtttaattttgctgaattatgggagtcaaca
cttcaggccgacgatcatatcatcagcctacaaagcagatctgtcatcgagcgggaattc
cagatgaacttgattcagacctattacgatgctctggcggctcaggaatggaaaaaagtg
attgaagaacagctgaggaattctcaggagcaggtggaacggattagtcaggaagtggct
gagggtgcgaagtccgaaagtgacatgtacgacattcgggtcgtttatacggaagaaaaa
aagatactgcaacagactattcaagatgaggaaaatcaaaagctggccttgttacaactg
atgaatgataatgtcctaaaaccggatgatatggtgttggtacatgaggaaatcgtacta
cagcagagtcgtacaaacctttctgagcatcccaagatcagattggaacaaacgaaaagg
gagcggctggagcatgagtataagcaattgctcgggccgatgcttccaaagctcacgctt
tcatattctttcggcactttctattccaataagataaaggatgtgtgggatacctctcta
aaatttgataatcagttgagcaataacaaaaatcaatttttggggctgaatctcattgtt
ccgttattctcccgcggcgaccgcatgcgggccagaaaggtgaaacggattgaaatgcag
gagcaacagctcattctggaaaaaaccagactggatctcgacaataggtatgaacaggaa
caacaaaagataaggcaatacgagggcctatatccagtcctatatgagcatctggaagct
tcaaaaaagtcactgcaaactacgcgtaccaagtttgaatttggcagggtggatatttcg
gcttacaaagcggccaaaaaccaggtactctcggcttcgtatgacttgttaaaaaaccat
ttatacaaattgatggcaatagaaatggtcaatactatgcaatag
DBGET
integrated database retrieval system
