Caldimonas thermodepolymerans: IS481_11685
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Entry
IS481_11685 CDS
T06911
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm01501
beta-Lactam resistance
sthm01503
Cationic antimicrobial peptide (CAMP) resistance
sthm02020
Two-component system
sthm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IS481_11685
09132 Signal transduction
02020 Two-component system
IS481_11685
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS481_11685
01503 Cationic antimicrobial peptide (CAMP) resistance
IS481_11685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_11685
02044 Secretion system [BR:
sthm02044
]
IS481_11685
01504 Antimicrobial resistance genes [BR:
sthm01504
]
IS481_11685
Transporters [BR:
sthm02000
]
Other transporters
Pores ion channels [TC:
1
]
IS481_11685
Secretion system [BR:
sthm02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IS481_11685
RTX toxin transporter
IS481_11685
Multiple protein transporter
IS481_11685
RaxAB-RaxC type I secretion system protein
IS481_11685
Antimicrobial resistance genes [BR:
sthm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
IS481_11685
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
IS481_11685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
MT
Motif
Other DBs
NCBI-ProteinID:
QPC30435
LinkDB
All DBs
Position
2496416..2497717
Genome browser
AA seq
433 aa
AA seq
DB search
MRSVAGGLVALLAAGAVQAQSLLEVYNAARNYDATYLAARAEAESAQYAAEQAYALRRPS
VGLSAGISRSETDPPVGNDRETTTRQAALQATQPLFNRANGVSIEQAERALEIARARLET
AEQDLIVRVAQAYFNVLAARDTLASAQANKAAISEQLASAKRNFEVGTATITDTREAQAR
FDLATAQEIAAQNNLEIAQAALNQLVGRNDVDPRPLAAPVSLPSLAAGTEQDWVQRSENA
PGVRQAALALQIAELETEKARAGHLPTLDLVGEVGRSSVTSNNPQQPSGHYGSTSVGVQL
RLPLFAGFAVQNRVRETLALEEKSRNELDAARRQVALATRQAYSSVQSGLAQVRALEAAE
ASSKLALEATQLGYKVGVRVNLDVLNAQTQLFNTQSELAQARYNVLVGSLRLRQAAGVLA
PDDLAPINALLAP
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccgtggcagggggcctcgtcgccctgctggcagccggtgcggtgcaggcgcag
agcctgctggaggtctacaacgcggcgcgcaactacgacgccacctacctggccgcgcgc
gccgaggccgagtcggcccagtacgccgccgagcaggcctatgcgctgcgccgcccgagc
gtcgggctgtccgccggtatcagccgcagcgagaccgatccgccggtgggcaacgaccgc
gagaccaccacccgccaggccgcgctgcaggccacccagccgctcttcaaccgcgccaac
ggcgtcagcatcgagcaggccgagcgtgcgctggagatcgcccgcgcccggctggagacc
gccgagcaggacctgatcgtgcgcgtcgcgcaggcctacttcaacgtgctcgccgcgcgc
gacacgctggcttcggcgcaggccaacaaggcggccatctccgaacagctggcctcggcc
aagcgcaacttcgaggtcggcaccgcgaccatcaccgacacccgcgaggcgcaggcccgc
ttcgacctggccaccgcgcaggagatcgcggcgcagaacaacctggagatcgcccaggcg
gcgctgaaccagctggtcggccgcaacgacgtcgacccgcgcccgctggccgcgccggtc
tcgctgccctcgctggcggccggcaccgaacaggactgggtgcagcgcagcgagaacgca
cccggcgtgcgccaggccgcgctcgccctgcagatcgccgagctggagaccgaaaaggcc
cgcgccgggcacctgcccacgctggacctggtcggcgaggtaggtcgcagcagcgtgacc
agcaacaacccccagcagccctcgggccactacggcagcaccagcgtcggcgtgcagctg
cgcctgccgctgttcgccggcttcgcggtgcagaaccgcgtgcgcgagaccctggccctg
gaagaaaagtcccgcaacgagctggacgcggcgcgccgccaggtggcgctggccacgcgc
caggcgtactccagcgtgcagtcgggcctggcccaggtgcgcgcgctggaagcggccgaa
gcgtcgagcaagctggcgctggaagccacccagctcggctacaaggtcggcgtgcgcgtg
aacctggacgtgctcaacgcccagacccagctgttcaacacgcaaagcgagctggcccag
gcgcgctacaacgtgctggtcggcagcctgcgcctgcgccaggccgccggcgtcctggcc
ccggacgacctcgcgccgatcaacgcgctgctggcgccctga
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