Sulfurifustis variabilis: SVA_2019
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Entry
SVA_2019 CDS
T05321
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
sva
Sulfurifustis variabilis
Pathway
sva01501
beta-Lactam resistance
sva01503
Cationic antimicrobial peptide (CAMP) resistance
sva02020
Two-component system
sva03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sva00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SVA_2019
09132 Signal transduction
02020 Two-component system
SVA_2019
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SVA_2019
01503 Cationic antimicrobial peptide (CAMP) resistance
SVA_2019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sva02000
]
SVA_2019
02044 Secretion system [BR:
sva02044
]
SVA_2019
01504 Antimicrobial resistance genes [BR:
sva01504
]
SVA_2019
Transporters [BR:
sva02000
]
Other transporters
Pores ion channels [TC:
1
]
SVA_2019
Secretion system [BR:
sva02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SVA_2019
RTX toxin transporter
SVA_2019
Multiple protein transporter
SVA_2019
RaxAB-RaxC type I secretion system protein
SVA_2019
Antimicrobial resistance genes [BR:
sva01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SVA_2019
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SVA_2019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
BAU48571
UniProt:
A0A1B4VC10
LinkDB
All DBs
Position
2086822..2088246
Genome browser
AA seq
474 aa
AA seq
DB search
MRCVSWRSIFGRHEPRPRTLQSERSRTLSALALCILGFPAGALADDLLAVYRQARDYDAR
WRSANAAYRAGLEKLPQGRSLLLPSLALKGQKIYTDGDIEYLDPSPFTSGERDYDFGEYG
VDLTQPLYRKESFALYGKAKAHVGLVEADFRAAQVDLIERVADSYFEMLFAQHDVRLSEA
ETASFKSQWERARERHRAGIATLLDVYETQAKYDLAVSNELKARKELDIKRESLRKLLGH
VPAELAELMPQPTLPTVRPETADEWVAIAEKHNPQLASVRFAAEEAEQELQRARGSHHPT
VDFVAGYSMTRTTGSVYTDSASRAELYSYGVQVEVPLYKGGALNSQVREAASLRDKAKED
LEEVRRTVALETRQAFLEVTHSLAEMKAMEQALRSAELQLSSTKSGLNAGVRTTTDLLQA
EQQVFAAKRDLARARYAYCTKIVQLHAAAGTADEEILAVINALLAGAQGTASKT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcgtctcatggcggtcgatcttcggaaggcacgaaccgcgcccccgtactctc
caatccgagcgatcccgtaccctctccgccctggcgctgtgcatcctcggttttcccgcg
ggcgccctggccgatgacctcctcgcggtctatcgccaggcccgcgactacgacgcccgc
tggcgttcggccaacgccgcctaccgcgccggcctcgagaagctgccccagggccgctcc
ctgctgctcccctccctggccctgaagggccagaagatctacacggacggcgacatcgag
tacctggacccgagcccgttcaccagcggcgagcgcgactacgacttcggcgagtacggg
gtcgacctgacccagccgctgtaccgcaaggagagcttcgcgctgtacggcaaggccaag
gcgcacgtcggcctggtcgaggcggactttcgcgcggcgcaggtcgatctcatcgaacgg
gtcgcggattcctatttcgagatgctgttcgcgcagcacgacgtgcgcctgtccgaggcg
gagacggcttcgttcaagagccagtgggaacgcgccagggaaaggcaccgggcgggcatt
gcgacgcttctcgacgtctacgagacccaggcgaaatacgatctcgccgtctcgaacgag
ctcaaggcgcgcaaggagctcgacatcaagcgcgaatcgttgcgcaagctgctcggccac
gtcccggcggagctggccgagctgatgccgcagccgaccctgcccacggtgcggccggag
acggccgacgaatgggtcgcgatcgcggaaaagcacaatccgcagctcgcatccgtccgc
ttcgccgccgaagaggccgagcaggaactgcagcgcgcccggggcagccatcaccccacc
gtcgatttcgtcgcggggtactcgatgacccgcaccaccggcagcgtctacaccgactcg
gccagccgcgccgagctgtacagctacggcgtgcaggtcgaagtgccgctctacaagggc
ggcgcgctgaattcccaggtgcgcgaagccgcctcgctgcgcgacaaggcgaaggaggat
ttggaggaggtgcgccgcacggtcgccctcgaaacccggcaggcgtttctcgaggtgacg
cacagcctcgccgaaatgaaggcaatggagcaggcgctgcgctccgccgagctgcagctc
tcctccacgaaatcgggcctcaatgccggtgtccgcaccacgaccgacctcctccaggcc
gaacaacaggtcttcgccgcgaagcgcgacctcgcgcgcgcacggtacgcgtactgcacg
aagatcgtccagctacacgccgcggccggcaccgccgacgaagagatcctcgcggtgatc
aacgccctgcttgcgggtgcacaggggacggcttcgaagacctga
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