Shewanella violacea: SVI_0462
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Entry
SVI_0462 CDS
T01206
Symbol
tolC
Name
(GenBank) outer membrane protein TolC
KO
K12340
outer membrane protein
Organism
svo
Shewanella violacea
Pathway
svo01501
beta-Lactam resistance
svo01503
Cationic antimicrobial peptide (CAMP) resistance
svo02020
Two-component system
svo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SVI_0462 (tolC)
09132 Signal transduction
02020 Two-component system
SVI_0462 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SVI_0462 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
SVI_0462 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_0462 (tolC)
02044 Secretion system [BR:
svo02044
]
SVI_0462 (tolC)
01504 Antimicrobial resistance genes [BR:
svo01504
]
SVI_0462 (tolC)
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_0462 (tolC)
Secretion system [BR:
svo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SVI_0462 (tolC)
RTX toxin transporter
SVI_0462 (tolC)
Multiple protein transporter
SVI_0462 (tolC)
RaxAB-RaxC type I secretion system protein
SVI_0462 (tolC)
Antimicrobial resistance genes [BR:
svo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SVI_0462 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SVI_0462 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DNA_repr_REX1B
Motif
Other DBs
NCBI-ProteinID:
BAJ00433
UniProt:
D4ZFI4
LinkDB
All DBs
Position
complement(526702..528045)
Genome browser
AA seq
447 aa
AA seq
DB search
MKFKIRTICAALTLAFSTSAVQADDLLQIYQQALTSDPIALQAQAKRDALYEKIEENRAP
LLPTISARVGYNKNWINNESPEPNTDSSGVNAGVTLNQVIYDHSAWVGLNLAELAASQAD
ATYASSLQTLIIRVTSAYFSVLSAKDTYEFQGSEKRAIERQLEQTKQRFAVGLTAITDVH
EAQAQYDLARAQEILAENELTNSYEALREITGIEHNSINILDTERFSAVTPSPTRANDWL
KMAEANSVDLLTTRIGKDMAQEAISLYKAGHMPSLSLNAGYTTNIQQENNNNDARDFDNG
TVGLTLSIPIFEGFKVTSQVNQAQYQYVEASEKMEQTYRKVVKDVRNNFNDVGASISSIR
AYEQSVISSESALKATQAGFEVGTRTIVDVLNRTRDLYDSKRKLSDARYGYINSILALKQ
AAGTLNEDDVIAINNGLTAQTTQTTTQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaagatccgaactatatgtgcagcgctcacgctggcattcagtacttctgct
gtacaagccgacgatttactgcagatatatcaacaagcgctaaccagtgaccctatcgcc
ctgcaagctcaggctaaacgcgatgccctgtacgaaaaaattgaagaaaaccgcgcgccg
ctactgccaactataagtgcacgagtgggctataacaagaattggatcaataacgaatct
cctgagcctaacacggattcaagtggcgtaaatgctggcgtgacactaaatcaagtcatc
tatgatcacagtgcctgggtgggattgaacctagccgaattagcggcctctcaagccgat
gcgacttacgcgtcatcactacaaactctgattatccgcgtaaccagtgcttatttctcg
gtgttatcggctaaagatacctacgagtttcagggatcggaaaagcgcgcgattgagcgt
cagctcgaacagacaaaacaaagatttgccgttggtttgactgccataactgatgttcat
gaagctcaggctcagtatgacttagctcgagcgcaagagatcttagctgagaatgaactg
accaatagttatgaggcgttacgtgagattacaggcatagaacataattctatcaatatc
ttagataccgagcgtttcagtgcagttaccccatctcctaccagagccaatgattggtta
aagatggccgaagccaacagtgtcgatctactgacgacgcgtataggtaaagatatggca
caagaagccattagtctctataaagccggtcatatgccgtccctgagtctaaatgcgggt
tacacaaccaatatacagcaagaaaataataataatgatgcacgtgattttgacaacggc
acagtaggcctgaccttgagcatacctattttcgaaggtttcaaggtcacctctcaagtg
aatcaggctcaatatcagtacgtggaagcgagtgagaagatggaacagacttaccgtaaa
gtagttaaggatgttcgtaacaacttcaacgacgtaggtgcttcaatcagctcaatccgt
gcctatgagcaatcagtaatctcatcagagagtgcactaaaagcgactcaggcaggtttt
gaagttggtactcgaaccatagtcgatgtacttaaccgtacacgtgatctgtatgactct
aagcgaaagctatctgatgcccgttacggatacatcaattcaatactcgcacttaaacaa
gcggcaggtaccttgaatgaagatgatgttatcgccatcaacaatggtttgactgcacag
acaacacagacgaccactcagtaa
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