Shewanella woodyi: Swoo_4394
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Entry
Swoo_4394 CDS
T00676
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
swd
Shewanella woodyi
Pathway
swd01501
beta-Lactam resistance
swd01503
Cationic antimicrobial peptide (CAMP) resistance
swd02020
Two-component system
swd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
swd00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Swoo_4394
09132 Signal transduction
02020 Two-component system
Swoo_4394
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Swoo_4394
01503 Cationic antimicrobial peptide (CAMP) resistance
Swoo_4394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swd02000
]
Swoo_4394
02044 Secretion system [BR:
swd02044
]
Swoo_4394
01504 Antimicrobial resistance genes [BR:
swd01504
]
Swoo_4394
Transporters [BR:
swd02000
]
Other transporters
Pores ion channels [TC:
1
]
Swoo_4394
Secretion system [BR:
swd02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Swoo_4394
RTX toxin transporter
Swoo_4394
Multiple protein transporter
Swoo_4394
RaxAB-RaxC type I secretion system protein
Swoo_4394
Antimicrobial resistance genes [BR:
swd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Swoo_4394
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Swoo_4394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ACA88646
UniProt:
B1KJH4
LinkDB
All DBs
Position
complement(5322774..5324171)
Genome browser
AA seq
465 aa
AA seq
DB search
MKLTRLACLSLCLICGTTLAQPMTFNAAWQQLLTVSDKLQAESQEVIRAQAEQQAGEDLG
MPSLDISGSYTHLEKPIELDLRDLNPLASLDPSSLPPALGGALASIPSSLFVTPFTEQDI
FRASLQAMWPIYTGGKITAAQGIHEAQVAEKEQQLQLVTRDLFNLLVDRYYAVSVTEMLM
QTQGQLVASLTEHVDHALKLEEQGQIAKVERLNAQVALENARVSAGSAKRQHEMAVIALS
RMLHQQSVTTASELFMLSSQPSLPRLSQLTMTQHPALRLLEAKEEQASGLIEVEKGRYKP
TVFLYGNYTLYEDDSLFSKVEPDWMVGLGVKVPLLSRDGRSGKVEAAKSALLQARYTKAQ
TQQDLSLLLDQSYRQLQQAQEEVVALNTSLSLAEENLRLREIAFNQGLSTSIDRVDAELK
LSAVKTQQLGAKYRYVQSYARLMAISGQLDDFIGRTNGLNNFGDK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaacgcgtttggcttgtttatctctgtgcttgatctgcggcactactttggct
cagccaatgacttttaacgcggcatggcagcagctattgaccgttagcgataagctacag
gccgaatctcaagaggtcatacgagcccaagctgagcagcaagcgggtgaagatcttggc
atgccctccctagatatcagcggtagctacactcaccttgaaaaacctattgagctggat
cttcgcgatttaaaccccttagcgtcactcgaccctagcagcttaccgccagctttaggt
ggtgcattggccagcattccaagttctcttttcgtcactccttttactgaacaagatatc
tttagagcgagtctgcaagcgatgtggcccatctataccggtggcaagatcaccgctgct
caagggatacacgaagcgcaggttgcagagaaagagcagcagttgcagctggttacacgt
gatctttttaatctcttagttgataggtattacgcagtttcagtgactgagatgctaatg
cagactcaggggcagttagtggcttcgttgactgagcatgttgatcacgcgcttaagtta
gaggagcaaggacaaatcgctaaagtggagcggctaaatgctcaagtggcgcttgaaaat
gctcgggttagcgctggtagtgctaagcggcaacatgagatggctgtgatcgcactgtca
cgtatgttgcaccagcagagtgtgacgactgcatcagagctgtttatgttgtcaagccag
ccctctttgccgcgtttgagccagctaaccatgacccagcatccggcattaagattactt
gaagctaaagaggagcaagccagtggtctgattgaggttgaaaaaggtcgctataaaccc
accgttttcctctacggtaattacaccttgtatgaggacgatagtctgttctctaaagtg
gagccagattggatggtcgggcttggggttaaagtgcctttgttgagcagagatggccgc
agtggaaaggtagaagcggctaaaagtgcactgctgcaagcgagatacactaaagcacaa
actcagcaagacttaagcttactactagatcaaagttaccgtcagcttcagcaggcacaa
gaggaggttgtggctcttaacacctccttgagtttggccgaagagaatttgcgtctgcgt
gaaatagcgttcaatcaaggtctctctacctctatcgacagagtggatgccgagttaaag
ctaagtgcagtgaagacacagcaacttggcgctaaataccgttatgttcaatcctatgcg
cggctgatggctattagtgggcagttggatgactttataggtcgtactaacggcttaaac
aattttggagataaataa
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