Rhizorhabdus wittichii RW1: Swit_1096
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Entry
Swit_1096 CDS
T00538
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi01501
beta-Lactam resistance
swi01503
Cationic antimicrobial peptide (CAMP) resistance
swi02020
Two-component system
swi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Swit_1096
09132 Signal transduction
02020 Two-component system
Swit_1096
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Swit_1096
01503 Cationic antimicrobial peptide (CAMP) resistance
Swit_1096
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_1096
02044 Secretion system [BR:
swi02044
]
Swit_1096
01504 Antimicrobial resistance genes [BR:
swi01504
]
Swit_1096
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_1096
Secretion system [BR:
swi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Swit_1096
RTX toxin transporter
Swit_1096
Multiple protein transporter
Swit_1096
RaxAB-RaxC type I secretion system protein
Swit_1096
Antimicrobial resistance genes [BR:
swi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Swit_1096
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Swit_1096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABQ67462
UniProt:
A0A9J9H9T1
LinkDB
All DBs
Position
complement(1230859..1232343)
Genome browser
AA seq
494 aa
AA seq
DB search
MKRKLRGAAAGRWTVSVAALVSVGFGTPAAADTLREALGLAYQSNPTLTGARAGLRATDE
DVGIARAQGLPDVSATGSYNEFVKRSANAFTQPKRSLGGSATVSVPIYQGGFVRNSIRAA
KARVEQGRAGLQATESDIFTQTVAAYMDVIRDTAIVDLNAGNVKVLETNLQASQDRFQVG
DLTRTDVAQSEARLAGARANLRTAQAQLDASRQTYLEVVGKFPDALETPPALPGLPSTSE
DAVDIAVTNNPDLASARQATRAAQYDIGVAEASRMPRLNAVGTGDYVDYRGTLAGGAAGV
RQVDKTATVSLQLQVPIYQGGGPAAQVRQAQARKSQAIENQTAVERAVIADARVAFARYE
AALGVIDSSVSAVSANELALEGVRAEQSVGNRNLLDVLNAEQELLNSRSTLVSAKRDAYV
AGFALIAAMGRAQAKDLGLDGGALYDPVANYRRVHGRIWDWDSDPRPKPVATSTLKEPSV
SAVPTHSLVESPAK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgcaagcttcgcggagcggccgccggccgctggactgtgtccgtcgcagcgctg
gtgtcggtcgggttcggcacgccggcggcggccgacacgctgcgcgaagcgctgggcctg
gcctatcagagcaatccgacgctgaccggcgcccgcgccggcctgcgcgccaccgacgag
gatgtcggcatcgcccgcgcccagggcctgcccgacgtcagcgccaccggctcctataac
gagttcgtcaagcggtcggccaacgccttcacccagccgaagcgctcgctcggcggatcg
gcgaccgtgtcggtgccgatctaccaggggggtttcgtccgcaactcgatccgcgcggcg
aaggcgcgggtggagcagggccgcgccggcctgcaggcgaccgagagcgacatcttcacc
cagacggtcgcggcctatatggacgtgatccgcgacaccgcgatcgtcgatctcaacgcc
ggcaatgtgaaggtgctggagaccaatctccaggcgagccaggaccgcttccaggtcggc
gacctcacccgcaccgacgtcgcccagtcggaggcgcgcctcgccggcgcgcgcgccaac
ctccgcaccgcgcaggcgcagctcgacgcgagccgccagacctatctggaagtggtcggc
aaattccccgacgcgctcgaaacgccgccggcgctgccggggctgccttcgacctcggaa
gacgcggtcgacatcgccgtcaccaacaatcccgacctcgcctccgcccggcaggcgacc
cgcgccgcccaatatgacatcggcgtggccgaggcgtcgcgcatgccgcggctcaacgcg
gtcggcaccggcgactatgtcgactatcgcggcacgctggccggcggcgccgccggcgtc
cgccaggtcgacaagaccgcgacggtgagcctgcagctccaggtgccgatctaccagggc
ggcggccccgccgcgcaggtccgtcaggcgcaggcgcgcaagagccaggcgatcgagaac
cagaccgcggtcgagcgggcggtgatcgccgacgcgcgggtcgccttcgcccgttacgaa
gcggcgctcggggtgatcgattcctcggtgtcggcggtgtccgccaacgagctggcgctc
gaaggcgtgcgcgccgagcagagcgtcggcaaccgcaacctgctcgacgtgctcaatgcc
gagcaggagctgctcaactcgcgctcgaccctcgtctcggcgaagcgcgacgcctatgtc
gccggcttcgcgctgatcgcggcgatggggcgcgcgcaggcgaaggacctcggcctcgac
ggcggcgcgctctacgatccggtcgccaattaccgccgggtccatggccgcatctgggac
tgggacagcgatccccggccgaagccggtcgcgacctcgaccctgaaggagccgagcgtt
tcggcggtgccgacgcacagcctggtggaaagcccggcgaaatag
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