Rhizorhabdus wittichii RW1: Swit_3231
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Entry
Swit_3231 CDS
T00538
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi01501
beta-Lactam resistance
swi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Swit_3231
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Swit_3231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3231
01504 Antimicrobial resistance genes [BR:
swi01504
]
Swit_3231
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_3231
Antimicrobial resistance genes [BR:
swi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Swit_3231
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Swit_3231
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Swit_3231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABQ69577
UniProt:
A0A9J9HDR4
LinkDB
All DBs
Position
complement(3552359..3553822)
Genome browser
AA seq
487 aa
AA seq
DB search
MPRSIPLRRPALLAGLVATLLSGCAAVPQVRPQVQAASAATAGLDGGAALAPVGDWWHGF
GDPQLDRIMAEALAGNPSLDVAMARLARAQAGIAANKAGLLPQVGVDASAIRQRLSEKYI
IPPPYGGSNRWIGDAQAKLDWSLDLAGRQKALVAQAGASADAAALDVEAARVTLSGAVAQ
SYVDLARATEQARIARRFVASREEQLRLAGTRKRTDLGSDFDLRAAETLLAEARQAGIRA
EGARQLMVHALAALAGRGADYHAAIADPTIRLDAALPVPDALPADLLGRRPDILAARARI
EAAEAGRKVARADFYPDIDLKGFIGLQAIGLGALFTGGAATYGAGPALHLPIFEGGRLKA
NYKGAVAGIDEAVASYNGAVVGAVRETADALSAIATNAADAAEQHKVVAGLGETVRLDEV
RLRTGLGARLDVLDAGDRLLAANQREVDLAADGAAARIRLLVAVGGSFDPHSRQNLASAA
GADAAGR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgccccgttcgatcccgctccgtcgcccggcgttgctcgccggcctcgtcgcgaccctg
ctgtcgggttgcgcggcggtgccgcaggtccggccgcaggtgcaggccgcttccgccgcg
acggccggcctcgacggcggcgcggcgctggcgccggtcggcgactggtggcacggcttc
ggcgatccgcagctcgaccggatcatggccgaggcgctggccggcaatccctcgctcgac
gtcgcgatggcgcggctggcgcgggcgcaggccgggatcgccgcgaacaaggccgggctg
ctgccgcaggtcggcgtcgacgcctcggcgatccgccagcggctcagcgagaaatacatc
atcccgccgccctatggcggcagcaaccgctggatcggcgacgcccaggcgaagctcgac
tggtcgctcgacctcgccggccggcagaaggcgctggtcgcgcaggcgggcgcctcggcc
gacgccgccgcgctcgacgtcgaggcggcgcgggtgacgctgtcgggcgcggtcgcgcaa
agctatgtcgacctcgcccgcgccaccgagcaggcgcgcatcgcccggcgcttcgtcgcc
tcgcgcgaggagcagcttcggctcgccggcacccgcaagcgcaccgacctgggcagcgac
ttcgacctgcgcgccgccgagacgctgctcgccgaggcgcgccaggccgggatccgcgcc
gagggcgcccgccagctcatggtccacgcgctcgccgcgctcgccgggcgcggcgccgac
tatcatgccgcgatcgccgacccgacgatccggctcgacgcggcgctgccggtgcccgac
gcgctgcccgccgacctgctcggccgccgccccgacatcctcgccgcccgcgcccggatc
gaggcggccgaggcgggccgcaaggtcgcccgcgccgatttctaccccgacatcgacctg
aagggcttcatcggcctgcaggcgatcggcctcggcgcgctgttcaccggcggcgccgcg
acctatggcgctggcccggcgctgcacctgccgatcttcgagggcggccggctcaaggcc
aattacaagggcgcggtcgccgggatcgacgaggcggtcgccagctataacggcgccgtc
gtcggcgcggtccgcgagaccgccgacgcgctctccgcgatcgccaccaacgccgccgac
gccgccgagcagcacaaggtcgtcgccgggctgggcgagaccgtccggctcgacgaggtg
cggctgcgcaccgggctcggcgcgcggctcgacgtgctcgacgcgggcgaccggctgctc
gccgccaaccagcgcgaggtcgacctcgccgccgacggcgccgccgcccgcatccgcctg
ctcgtcgcggtcggcggcagcttcgatccgcacagccgccagaatctcgcatcggccgcc
ggtgccgacgccgcagggagataa
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