Rhizorhabdus wittichii RW1: Swit_3841
Help
Entry
Swit_3841 CDS
T00538
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi01501
beta-Lactam resistance
swi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Swit_3841
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Swit_3841
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3841
01504 Antimicrobial resistance genes [BR:
swi01504
]
Swit_3841
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_3841
Antimicrobial resistance genes [BR:
swi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Swit_3841
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Swit_3841
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Swit_3841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABQ70186
UniProt:
A0A9J9HEH6
LinkDB
All DBs
Position
complement(4216907..4218379)
Genome browser
AA seq
490 aa
AA seq
DB search
MIRRAAALLTMTALAACSFEPAYHRPAPAVPAALPDAGQGEAPARLDYREIFRDPRLVTL
IDRALANNQDLKAALANVRSARALVTVARADLLPQLDGSAGLTIGDSSNETRGGTGSGAT
GGSGNGASTGGRRTTYNADLGVSWEIDLFGRLRSLNNAAFDTYLGSEAAQRGARLSLVAG
VANAYLALAADRSLLAIATETRTSAARSVELTQALLKGGVAPRTDLRQAETVLAQAEADE
ASLETAVAQDRNALQLLVGAAIEDDLLPASIESLDGQLAEVPAGLDSSILLRRPDVVESE
YALRAANARIGAARAAFFPRIGLTALAGFASSALSSLFQGSAFTWSVAPSATLPIFDGGA
NLGNLRYSKAQRDLALANYQKAIQSAFRDVADALARRATIDRQLAASTKLDASARDSLFL
ANARYREGIDPYLNMLDAQRTAYGAARTLAQARLLKAQNLVTLYQALGGDQLIDTSGDSF
SLLSVSHPKR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatccgccgcgccgccgcgctgctgacgatgaccgcgctcgcggcgtgcagcttcgag
ccggcctatcaccggccggcgcccgccgtccccgccgccctgcccgacgccggccagggc
gaggcgcccgccaggctcgactatcgcgagatattccgcgacccccggctggtcacgctg
atcgaccgggcgctcgccaacaaccaggacctcaaggccgcgctggccaatgtccggtcc
gcccgcgcgctggtgacggtcgcgcgcgccgacctcctgccccagctcgacggatcggcc
ggcctcaccatcggcgacagctcgaacgagacgcgcggcggcacgggcagcggcgcgacg
ggcggaagcggcaacggcgcgagcaccggcggccggcgcaccacctacaatgccgatctg
ggggtaagctgggagatcgacctgttcggccggctccgcagcctgaacaacgccgcgttc
gacacctatctcggcagcgaggcggcccagcgtggcgcccgcctcagcctcgtcgccggg
gtcgccaacgcctatctggcgctcgccgccgaccgcagcctgctcgccatcgccaccgag
acccggaccagcgcggccaggagcgtcgagctgacccaggcgctgctcaagggcggcgtc
gccccgcgcaccgacctgcggcaggccgaaaccgtgctggcccaggccgaggccgacgag
gccagcctggagaccgccgtcgcgcaggaccgcaacgcgcttcagctcctcgtcggcgcg
gcgatcgaggacgatctgctgccggcctcgatcgagagcctcgacggccagctcgccgag
gtgccggccggactcgactcgtcgatcctgctgcgccggccggacgtggtcgaaagcgaa
tatgcgctgcgggcggccaatgcccggatcggcgcggcgcgggccgccttcttcccgcgc
atcggcctgaccgcgctcgccggcttcgccagcagcgcgctgtcgagcctcttccagggc
agcgccttcacctggagcgtcgccccctcggcgacgctgccgatcttcgacggcggcgcc
aatctcggcaatctgcgctactcgaaggcgcagcgcgacctggcgctcgccaattaccag
aaggcgatccagtcggccttccgcgacgtcgccgacgcgctggcgcggcgcgcgacgatc
gaccggcagctcgccgccagcaccaagctcgacgcgtcggcccgcgattcgctgttcctc
gccaatgcccgctaccgcgagggcatcgatccctatctgaacatgctcgatgcgcagcgc
accgcctatggcgccgcgcgcacgctggcccaggcgcggctgctcaaggcgcagaatctg
gtgacgctctaccaggcgctgggcggggaccagttgatcgacacatctggcgattcattc
agcctgttgtcagtttcgcaccctaaacgatga
DBGET
integrated database retrieval system
