Sediminicola sp. YIK13: SB49_11105
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Entry
SB49_11105 CDS
T04145
Name
(GenBank) transporter
KO
K12340
outer membrane protein
Organism
syi
Sediminicola sp. YIK13
Pathway
syi01501
beta-Lactam resistance
syi01503
Cationic antimicrobial peptide (CAMP) resistance
syi02020
Two-component system
syi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SB49_11105
09132 Signal transduction
02020 Two-component system
SB49_11105
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SB49_11105
01503 Cationic antimicrobial peptide (CAMP) resistance
SB49_11105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syi02000
]
SB49_11105
02044 Secretion system [BR:
syi02044
]
SB49_11105
01504 Antimicrobial resistance genes [BR:
syi01504
]
SB49_11105
Transporters [BR:
syi02000
]
Other transporters
Pores ion channels [TC:
1
]
SB49_11105
Secretion system [BR:
syi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SB49_11105
RTX toxin transporter
SB49_11105
Multiple protein transporter
SB49_11105
RaxAB-RaxC type I secretion system protein
SB49_11105
Antimicrobial resistance genes [BR:
syi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SB49_11105
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SB49_11105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Snf7
Motif
Other DBs
NCBI-ProteinID:
ALM08288
UniProt:
A0A0S1SEG4
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All DBs
Position
2485400..2486737
Genome browser
AA seq
445 aa
AA seq
DB search
MKQFILTAFTIGLSFASFAQEQATPSFSLEEAVAYALENNYKAINANKDIIDAQKQKWET
IAGGLPQIEGAVSYQNLLKQPVSLIPAEFFGGEPGTFTPITFGQAQTASATATLKQQIFD
GSYIVGVQASKAFISYSANNKEKTDLEVRKAVVEAYGNVLLARESVLIFEKNRETLSKNL
YETKKIYENGLGDEESVDQLQITLSSVENQLRNAQRLEKLTLQMLNLVMGLDISTPTVLK
EDLDKLTQREMDLRLLDEELTMENNVDYKLAYNLNEQRFFELKLAKSRTLPTLNAFINYG
STAFSENFDFFNGEQQWFDSSILGFDLSIPIFSSFKRNASTARAKIALDKAKNQLEESKE
NIRLQLENAKSEYLFSIEQYDTSKANLALAERIEQKNQIKYFEGLASSFELRQAQTQLYT
AQQEYLQSMVGVINKKTELETIINN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtttatactaacggcctttaccataggcctaagcttcgcttcatttgcacaa
gagcaggcaaccccaagcttttcacttgaggaagcagtggcctatgccttggaaaataat
tacaaggcgattaatgccaacaaagacattatagatgcgcaaaaacagaaatgggagacc
attgctgggggacttcctcaaatagaaggcgcagtaagttaccaaaatctgttaaagcaa
cccgtatcccttattccagctgagttttttggtggagaacctggtacattcactcccatt
acctttggccaagcacaaacggcaagtgccacagccacgttaaaacaacagatttttgac
gggtcctatatcgtcggggtacaggcttcaaaagcatttatcagttacagtgccaacaat
aaggaaaaaacagatcttgaagttcgcaaggccgtggtagaggcttacggcaatgtacta
ctcgccagagaaagtgttcttatcttcgaaaaaaacagagaaacacttagcaaaaacctt
tacgaaacgaaaaaaatatatgaaaatggcctgggagacgaggagagcgtagaccaatta
cagatcaccctttcatccgtagagaaccaactgcgcaatgcccaacgtttagagaaattg
acccttcaaatgttgaatctggtgatgggtctggacatatcaacacctactgttttaaag
gaagatcttgataaacttacccaaagagaaatggacctaaggttattggatgaagagttg
accatggaaaacaatgtagattataagttggcctataacctgaacgagcaacgctttttt
gagctgaagttggcaaaaagtagaactttgcccaccctgaatgctttcataaattatggc
tccacagcatttagtgagaactttgatttttttaatggggaacaacaatggttcgattcg
tcgattctagggtttgatcttagcattcccattttcagttcctttaaaagaaatgcttct
actgcgagggcaaaaattgcccttgataaggccaaaaaccagttagaagagtccaaagaa
aatatccgccttcaactggaaaatgccaaaagtgaatatcttttttccattgaacagtat
gacacttctaaagcaaatttggccctggcagaacgcatagaacaaaaaaaccagatcaaa
tactttgaggggttggcctcgagttttgaacttagacaggcccaaacacaattgtataca
gcccagcaggaatatctgcaatccatggtaggggttatcaataagaaaaccgaactggaa
accattatcaacaactaa
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