Sediminicola sp. YIK13: SB49_14825
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Entry
SB49_14825 CDS
T04145
Name
(GenBank) transporter
KO
K12340
outer membrane protein
Organism
syi
Sediminicola sp. YIK13
Pathway
syi01501
beta-Lactam resistance
syi01503
Cationic antimicrobial peptide (CAMP) resistance
syi02020
Two-component system
syi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
syi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SB49_14825
09132 Signal transduction
02020 Two-component system
SB49_14825
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SB49_14825
01503 Cationic antimicrobial peptide (CAMP) resistance
SB49_14825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syi02000
]
SB49_14825
02044 Secretion system [BR:
syi02044
]
SB49_14825
01504 Antimicrobial resistance genes [BR:
syi01504
]
SB49_14825
Transporters [BR:
syi02000
]
Other transporters
Pores ion channels [TC:
1
]
SB49_14825
Secretion system [BR:
syi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SB49_14825
RTX toxin transporter
SB49_14825
Multiple protein transporter
SB49_14825
RaxAB-RaxC type I secretion system protein
SB49_14825
Antimicrobial resistance genes [BR:
syi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SB49_14825
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SB49_14825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ALM08926
UniProt:
A0A0S1SF92
LinkDB
All DBs
Position
3335625..3336974
Genome browser
AA seq
449 aa
AA seq
DB search
MKIKFIIVLVLFSIGSVTAQMKKWTLQECVDYAYENNLSIEQFELDLESIKLDKSDAIGG
FLPSLSASSTLSGNTGLSFDPTNNQPVTTTIVTASGGLSSSAVLFDGLRNIHRLNRAKLA
ALASQYRLEDLKDDIGLSVANGYLQILLNKESLVVFKAQYAVTEQDLKRTKELVESGVVP
MGDLLEVEATAATQEQQIVNAENLVFISRINLAQLLQITDYDNFDIVDQEFMVPPSNILD
NSPKTIFDKALTFRNDIKLAESNVDVAEKDLDIAKGALYPTLRGFFNYNTRYSDQPSFDP
VTNTFMTTSFGDQLWMNDGISYGAQLSIPIFNGFSVKNNIKRSEINVDRSRLQLEQDKLA
LEANVNQAYADVKNSYKSYEAAQKTLEARKTAYEYTRERFEVGLMNAFDFSQSQARVDNA
EADLIRTKYDYIFRLKVLEFYFGIPITVN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaagtttataatagttttggttcttttttcaataggatcggttacggcacaa
atgaagaaatggacgttacaagagtgtgtcgattacgcctacgagaataatttgagtatt
gagcagtttgaattggatttggaaagtataaaactcgataaatcggatgccattggaggt
tttcttccaagtttaagtgcctcttccactttatctggaaatactggattatcctttgac
cctaccaacaatcagcctgtaaccacaaccattgttacggcgtctggtggattgtcatct
tccgcagttctttttgacggcctaagaaacatccatagactgaaccgtgccaagcttgca
gcccttgccagccagtatagattggaagatttaaaagacgatattggattgtctgtagcc
aatggatacttgcaaatattattgaacaaggaatctcttgtagtttttaaggcacagtat
gctgttacggaacaagatttaaaacgcaccaaagagttggtagaatcgggcgtggtgcct
atgggcgatttattggaggtagaagcaacagctgctactcaggagcaacaaattgtaaat
gcggagaaccttgtgtttatttcccgtattaatttggcccagttactgcagatcacggat
tacgataattttgatatcgtggaccaagaatttatggtgccgccatccaatatattggac
aattctcctaagactatttttgataaggcacttaccttcaggaatgatattaagttagcc
gaatctaatgtagatgttgcggagaaagatttagacattgccaagggtgcgctttatcct
acgttaagaggtttttttaactataatacgagatactcggatcagccgtcatttgatccc
gttaccaacacgtttatgaccacaagttttggggatcaattatggatgaacgatggtatc
tcttatggtgcccagttaagcattcctatattcaatggctttagtgtgaagaacaatatc
aaaaggtcagaaattaatgttgacaggtcaaggcttcaattagagcaggacaaattggcc
ttggaagcaaatgtgaaccaagcgtatgctgatgtcaaaaattcttataagtcctatgag
gctgctcaaaagacgttagaagctagaaaaacggcctatgagtatacaagggaacgtttt
gaggtaggattgatgaatgccttcgattttagccagtcacaagctagggtagataatgca
gaggcagatttgatacgtacaaaatatgactatatttttagattgaaggtattagagttt
tattttggtattcctataaccgtaaactaa
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