Shewanella yunxiaonensis: KDN34_04640
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Entry
KDN34_04640 CDS
T07775
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
syk
Shewanella yunxiaonensis
Pathway
syk01501
beta-Lactam resistance
syk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KDN34_04640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KDN34_04640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syk02000
]
KDN34_04640
01504 Antimicrobial resistance genes [BR:
syk01504
]
KDN34_04640
Transporters [BR:
syk02000
]
Other transporters
Pores ion channels [TC:
1
]
KDN34_04640
Antimicrobial resistance genes [BR:
syk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KDN34_04640
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
KDN34_04640
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
KDN34_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Oleosin
Motif
Other DBs
NCBI-ProteinID:
QUN06741
LinkDB
All DBs
Position
complement(987692..989110)
Genome browser
AA seq
472 aa
AA seq
DB search
MLWPGSNVMTAKKLFPISAIAAAMMLLSGCGVFTRATFQPPEVIIPANWQQTTVNQQVSL
DPWWQKFNNPELNQLITDVLKKNNELTLATLTLQKARLEAGLTATDRWPQVSASAAASKS
KLLDGGSSSNSYSASFSVSYEADLWGKVAANVDASSWSAMASAEDRESTAQSLVATTASL
YWQIGYLKQRITLSQNSIDYAKQTLELTQNQYAAGAVSKLNVLEAQRNLAGQESSHSELL
QQLTEAENALALLFNQPPLQLSLQIDKLPNGPVPEIAAGVPADLLVRRPDVKAALYSLRA
ALASKDATFASYFPTLSLTGAVGDSSNELTNLLRNPVGTLGAGLTLPFLQWQQMSLNNQM
AEVDYESAVVTYRKTLYQAFEDVNNAISARRQYAYQGEKLQLQYTAAAAAEKIYESQYRH
GAIAIQNWLDAQETRRSAEVSLLQNHYNQLTAQATLYQALGGSDIAPPLAEN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgctctggcccgggagtaatgtgatgaccgctaaaaaacttttcccaatctctgctatc
gctgcggcgatgatgttactcagtggctgcggtgtgtttacccgcgcgacttttcagcca
cccgaagtcatcattccggcaaactggcagcaaaccacggtgaaccagcaggtcagtctc
gacccctggtggcaaaaattcaataatcccgaacttaatcagctcattactgatgtactg
aaaaaaaacaatgagttgacgttagcgacgcttacattacaaaaagcccggttagaagcc
gggctgacagctaccgacaggtggccccaagtgtcagccagtgctgctgccagcaaaagt
aaattgctggatggcggctcgtccagtaacagttacagtgccagtttttccgtcagttat
gaggccgatttgtggggcaaagtggcagccaatgtcgacgccagcagttggagtgccatg
gccagtgccgaagaccgggaaagtaccgcgcaaagtttagtcgcgaccacggcgtcgctg
tattggcaaatcggctatcttaagcaacgcataacgctgagtcagaacagtattgactat
gccaaacaaacactggaactgacccagaatcaatatgctgccggagcggtgtctaaactt
aatgtgctggaagcccagcgcaatctcgcaggacaagaatccagtcatagtgagttattg
caacagctgacggaagctgagaatgcattggcgttattgttcaatcaaccgccgcttcaa
ctgtcactgcaaattgataagctaccgaatggccccgtgcccgaaatcgccgcgggcgtg
cctgccgatctactggtgcggcgaccagatgtaaaagccgcgttgtattccttacgtgcg
gcgctggcaagcaaagatgccacctttgccagttatttcccaacactgagcctgactggt
gccgttggcgattcatctaatgaattgactaacctgctgcgtaatccggttggcaccttg
ggagcgggattaacattgccattcctgcaatggcagcagatgtcgcttaataatcagatg
gcggaggtggactacgagagtgccgtagtcacctatcgtaaaaccctgtatcaagcgttt
gaggatgtgaataacgcgatatccgcacgacgccaatacgcctatcaaggggaaaaactg
cagctgcaatatacagccgcagcagcggctgagaaaatttatgaaagccagtatcgccat
ggtgcaatagcgattcagaactggctggacgcgcaggaaacacgtcgtagcgccgaagta
tccttgctgcaaaatcactacaatcagctgacggcacaagcgacgctttatcaagcgctt
ggtggcagtgatatcgcgccgccgctcgccgaaaattaa
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