Shewanella yunxiaonensis: KDN34_14595
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Entry
KDN34_14595 CDS
T07775
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
syk
Shewanella yunxiaonensis
Pathway
syk01501
beta-Lactam resistance
syk01503
Cationic antimicrobial peptide (CAMP) resistance
syk02020
Two-component system
syk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KDN34_14595 (tolC)
09132 Signal transduction
02020 Two-component system
KDN34_14595 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KDN34_14595 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
KDN34_14595 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syk02000
]
KDN34_14595 (tolC)
02044 Secretion system [BR:
syk02044
]
KDN34_14595 (tolC)
01504 Antimicrobial resistance genes [BR:
syk01504
]
KDN34_14595 (tolC)
Transporters [BR:
syk02000
]
Other transporters
Pores ion channels [TC:
1
]
KDN34_14595 (tolC)
Secretion system [BR:
syk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
KDN34_14595 (tolC)
RTX toxin transporter
KDN34_14595 (tolC)
Multiple protein transporter
KDN34_14595 (tolC)
RaxAB-RaxC type I secretion system protein
KDN34_14595 (tolC)
Antimicrobial resistance genes [BR:
syk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
KDN34_14595 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
KDN34_14595 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QUN05407
LinkDB
All DBs
Position
3185515..3186837
Genome browser
AA seq
440 aa
AA seq
DB search
MKFKIRTLCAALTLAASAHAAHADDLLQIYQQALKSDPVVLQAKAQRDQLYEAIEVNRAS
LLPTISGQIGYSKAWNSYSGNSRGLTGTLSLSQSIYDHSVWVGLSLAEKTAAQADADYAA
SLQSLIIRVTSAYFDVLSAKDTYEYQIAERTAIERQLEQTKQRFAVGLTAITDVHEAQAQ
YDLANAAVITAQNSLTNSYEALREITGVDHTDLKVLDTDRFSASMPTPATPQQWQNLAEQ
NSLSLLSYRLGKDIAKETITYYKAGHYPSLSLDAGYTKAYDAQTYGNDIPDYDNKSVGIT
MSVPIFEGFKVTSQVKQAQYAYVQANQLLEQNYRLVVKNIRSDFNNVNASISSIKAYEQS
VVSSESALKATQAGFEVGTRTIVDVLNSTYNLYNSKRQLSDARYSYINSILALKQAAGTL
TEDDVMAINKGLTADNRQQP
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaagatccgcactttatgcgcggcgttaacgctcgctgcttcagctcatgct
gctcacgccgacgatttgcttcagatttaccagcaagctctcaagagtgaccctgtcgtt
ctgcaggccaaagcacaacgtgatcagctttatgaagcgattgaggtcaatcgcgcctca
ttgctgccaacaattagtgggcagattggctatagcaaagcctggaatagctatagtggc
aacagtcgcggtcttactggcaccttgtccctcagtcagagtatctacgatcattctgtt
tgggtgggattgtctctggcagagaaaactgccgcgcaggccgatgctgactatgccgct
tctttgcagagtctgatcatccgcgtcacttccgcctattttgacgtgttgtcagccaaa
gatacctatgagtatcaaatcgctgagcgcaccgctattgaacgccagttagagcagacc
aaacagcgttttgccgtcggcttaaccgcaattaccgatgtgcatgaagctcaggcgcag
tacgatctggccaatgcggcggtgattaccgctcagaatagcctgacaaacagctatgag
gcattacgcgaaatcacaggggttgatcatactgatcttaaagtactggatactgaccgt
ttctcggcctcaatgccgacgccggcgactcctcagcaatggcaaaatctggcagaacaa
aatagtttgtcgctgttgagttatcgtttaggtaaagatatcgccaaagaaaccattacc
tactataaagccggacattacccatcgttaagcttggatgctggatacaccaaggcctac
gatgcccagacttatggaaatgatattcccgactatgacaacaaaagtgtcggcatcacc
atgagtgttcctatctttgaaggtttcaaagtaacctctcaggtaaaacaggcacaatat
gcttatgttcaggccaatcagttactggaacagaactaccgtctggttgtgaaaaatatt
cgcagcgacttcaacaacgtcaacgcgtctattagttctatcaaagcctatgagcagtca
gttgtttcttctgaaagtgcactgaaagccactcaggcagggtttgaagtgggtacgcgt
accattgttgatgtgctcaatagcacctacaacttatataattccaaacgtcagttatct
gatgcgcgctacagctatatcaactccattctggcattgaaacaagctgccggtacgctg
accgaagatgatgtgatggccattaataaggggctgacggccgataatcgtcagcagcct
taa
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