Shewanella yunxiaonensis: KDN34_15475
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Entry
KDN34_15475 CDS
T07775
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
syk
Shewanella yunxiaonensis
Pathway
syk01501
beta-Lactam resistance
syk01503
Cationic antimicrobial peptide (CAMP) resistance
syk02020
Two-component system
syk03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
syk00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KDN34_15475
09132 Signal transduction
02020 Two-component system
KDN34_15475
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KDN34_15475
01503 Cationic antimicrobial peptide (CAMP) resistance
KDN34_15475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syk02000
]
KDN34_15475
02044 Secretion system [BR:
syk02044
]
KDN34_15475
01504 Antimicrobial resistance genes [BR:
syk01504
]
KDN34_15475
Transporters [BR:
syk02000
]
Other transporters
Pores ion channels [TC:
1
]
KDN34_15475
Secretion system [BR:
syk02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
KDN34_15475
RTX toxin transporter
KDN34_15475
Multiple protein transporter
KDN34_15475
RaxAB-RaxC type I secretion system protein
KDN34_15475
Antimicrobial resistance genes [BR:
syk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
KDN34_15475
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
KDN34_15475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QUN05568
LinkDB
All DBs
Position
complement(3394158..3395558)
Genome browser
AA seq
466 aa
AA seq
DB search
MKRLRFAWLLLWPLVLPSVFAEDFSFDSAWQRLLNVSDKLAADNQQLRRAEAEQDAATGL
YLPSLSINGSYTHMQQPIELDLRKLNPLASLDVSSLPSEYAAILSAIPSSMFVTPFTEQD
VFNASLQAMWPIYTGGQITAAQGIQKAKVAEEQQQQELSRRELFTTLVDRYYAVSVAGAL
VQTQQQLVDSLQQHYQHALKLEQQGQIAKVERLNAQVALDDAQVTLGSVKRQYEMARIAL
SRLLHDSDASISSPMFVLQTPLSLPQLTELTLQQHPALKLLNAKEQQAKGLIDLEKGKYK
PTVYLYGNYTLYEDDSLLSQMTPDWMVGVGVKVPLLTREGLSGKVQAAKSALLQARYTRA
QTTQDLSLLVDQSYRQMLQAQEEINALESSKALAEENLKLRELAFSQGLSTSLERVDAEI
KLSAVKTKELAAHYRYLQAYARLMAVSGQLDEFIGHSKQQETGHAG
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagagattgcgattcgcctggctgctgttgtggccactggtgctgccgtcggttttt
gctgaagatttcagttttgacagtgcctggcagcgcctgcttaacgtcagcgataaactt
gctgccgataatcagcagttgcgccgagccgaggccgagcaggatgctgccaccggtctc
tatctgccttcgctcagtatcaacggcagttatactcacatgcagcagccgatagaactg
gatttgcgcaaactcaatccgcttgcttcccttgatgtctcctcgcttcccagcgaatac
gctgcgatcctcagtgccattcccagctcaatgtttgtcaccccgtttactgagcaggat
gtatttaatgccagtctgcaggcgatgtggccgatttacactggcggacagataacggcc
gctcagggaattcaaaaggccaaagtcgcggaagaacaacaacagcaagaactgagtcgg
cgcgaattgtttaccaccctggttgaccgctactacgccgtcagcgtggctggcgcgttg
gtgcaaacccagcagcaactggtcgattctctgcagcagcactaccaacatgcattaaag
ctggaacagcaggggcagattgccaaggtggaacggctgaatgcccaggtggcgctggac
gatgcccaagtgacgcttggcagtgtgaagcggcagtatgaaatggcgcgtattgccttg
tcgcggttgctacatgactcagacgccagcatcagttcgccaatgtttgtattgcaaaca
ccgttatcactgccacagttgaccgagttaacgctacagcagcacccagcgctgaagcta
ctgaatgccaaagaacagcaggccaaaggcttgattgatcttgaaaaaggcaaatacaag
cccacggtttatctatacggtaattacacgctgtatgaagatgactccttactgtcacag
atgacgcccgactggatggtgggggtcggcgtgaaagtgccattacttactcgcgaaggg
ctcagcggcaaggtacaggccgcaaaaagtgctttattgcaggcacgttatacccgcgcg
caaactacccaggacctgagtttattggtggaccagagttaccggcagatgttgcaggcg
caagaagagatcaacgccctcgagagctccaaagcgttggccgaggaaaatctcaaactg
cgggaacttgcgttcagtcagggattatccacctcgctggagcgggtcgacgcagaaatc
aaactcagcgccgtcaaaaccaaggaattagcggcacattatcgttatctgcaggcttat
gcacgcttgatggcagtcagcggacaactggatgaatttatcggacacagtaagcagcag
gagacaggtcatgcgggttaa
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