Trichosporon asahii var. asahii: A1Q1_03481
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Entry
A1Q1_03481 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
A1Q1_03481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tasa03400
]
A1Q1_03481
Enzymes [BR:
tasa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
A1Q1_03481
DNA repair and recombination proteins [BR:
tasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
A1Q1_03481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
BRCT_2
BRCT
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
25986994
NCBI-ProteinID:
XP_014178754
UniProt:
J6ET21
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MPLYRDGKVYPSHTQEETQDAPAPSQLAPATQLERSPDCRNFKDTPAFGILCSTMDRLRN
EKPAKRIDTLTRERPVYHLKEANLARAYTEVLGLDKHGDAAKRLKNWKTPVDGQVGSSSV
PIADTKENASGDFARVAYHEIKSRSTVEQGSLTIGDVNDLLDKLAGPNVKTADVVAILRT
VNEKATAAEQEWIIRIILKAGTLFNVCSDLKRVCWTLYEPDIKLEKHCFLPQLCHRSPNS
NHDAIAKLVGGPSLEFIMEEKLDGERIQLHMRGGGAEWFYCSRKAKDYIKVFDILYLNGK
CLTDRRLDERKKLLRSPRLFSNLDAFKGRLEFVEERRGRTGKDIRNFLEEILEQKILISW
YLVAGGDREVARGRFPACFVVCESPKKTTGAESGRGEKHSRALADSRFTTLCKVGSGMTL
ADYEWILGHEVADATADVYIEPEHSFVIAVKASEIVFPATGYGSGYTLRFPRCRYIFWDR
ESRSHPSSDETQDRDMWNCLSLQEFTEALQNKENKRYTDDDQGTFFVVASEDAESQRAFT
QTLAEYDAKLGSSNADSKNEEMEEEEEDDEQSAVADAVDKADVFATKQLVDWGMGDDDGR
TPSFSPTLRSAAADDSDASSHDEAEDQEEYEEEEEEEEREEEAGTREMSPTLPAPSTGSD
PQASQAAQEDDGEGYRPLFPVAQAGKESQMSGEAMEYDEDSLFATFTFYIDTPENAELND
LASSSPPSAAIERLDKVAGLLTEHGGRIVTNLMDATHVIMDDEDSAPDLRPKRKYIVTPS
WVEECVDEDTLVDEDSKTSQTQSALMTKSEYQGTAAPSRYDRRKPIPNLSGAGLSVGHLR
PGAHISTAARETM
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcctttataccgggatggcaaggtatatccctcacacactcaagaagagacccaggat
gctccggcgccctctcaactcgcccccgctacgcagctcgagcgttcgccggactgccga
aacttcaaagacacgcctgcctttggcatcctgtgctcgacgatggaccgtctgcgtaac
gagaagcccgcaaaacgtatagataccttgacaagggagagaccagtctaccacctgaag
gaggcaaaccttgcccgagcctacacggaggtactgggactcgataagcacggagatgcc
gccaagcgtctcaagaattggaagacacccgtggacggacaggtgggctcttcttctgtg
ccgattgctgatacaaaggaaaacgcgagtggtgatttcgcccgcgtcgcgtaccacgag
atcaaatcgcgatcgacggtggaacaaggttccctcacgataggcgacgtgaacgatctg
ctcgacaagctggccgggccaaacgttaaaactgccgatgtggttgccattctgcgtacg
gtgaatgagaaagcgactgcggccgagcaagaatggatcatcaggatcatcctgaaagct
ggcactctgttcaacgtctgttctgacttgaagcgcgtatgctggactctgtacgagcca
gacatcaagttggagaaacattgcttccttcctcaactgtgccatcgttcgccgaactcc
aatcacgatgccatcgccaagctcgtcggtggacccagcctggagttcatcatggaggag
aagctagatggcgagcgaatccagcttcatatgcgcggcggcggagctgagtggttctat
tgctcacggaaggcgaaagactacatcaaggtcttcgacatcctctacctgaacggcaaa
tgcctgacagatagacgcctggatgagaggaagaaactgcttcgatctcccagattgttc
agcaatttggacgcatttaagggccgcctcgagttcgttgaggagcgaaggggcaggacg
gggaaggacatccgcaacttcttggaggagattctggagcaaaaaatcttgatctcctgg
tacttggtggctggtggggacagggaggtcgcacggggaagatttccagcctgctttgtg
gtttgcgaatcccccaagaagacgacgggagcggagagcggccgaggtgagaagcattca
cgggctcttgctgactccaggttcaccaccctctgcaaagtaggatcaggaatgacactc
gccgactacgaatggattctaggtcatgaggtagctgacgcgacagcggatgtgtacatt
gagcccgagcactcgttcgttattgctgtcaaggcttctgagatcgtcttccccgccact
gggtacggttccggctacacgcttcgcttcccacgctgtcgctacatcttttgggacaga
gagagccgcagccatccgtcttcagatgagactcaggaccgcgacatgtggaattgcttg
agtcttcaagagtttacggaggcccttcagaataaggagaacaaacgctacacggatgac
gatcaaggcacgttcttcgtcgtggcgtctgaggatgccgaatctcaacgagcgtttacc
cagacgttggctgagtacgatgcgaagttgggttccagcaacgccgacagcaagaacgag
gagatggaagaggaagaagaggacgacgagcagtcggctgtagctgatgcggtcgataag
gctgacgttttcgccacgaagcagcttgtcgactggggcatgggcgatgacgatgggcgt
actccttcattctcaccaactcttcgctccgctgctgcggacgacagcgacgcctctagc
cacgacgaagcggaagatcaagaggagtacgaggaggaggaggaagaagaagaacgggag
gaggaagcaggaacgagggagatgtcgcccacgctgcccgctccttcgactggctccgac
cctcaggcctctcaagcagcgcaggaagacgatggcgagggataccgaccgctgttcccc
gttgcacaggctggcaaagagtcccaaatgagtggcgaggcgatggagtacgacgaggac
tcgctcttcgcgacattcaccttctacatcgacacaccggagaatgcagagctgaacgat
ctggcctcatcctcgccgccctctgccgcaatagagcgcctcgataaggtcgccggcctc
ctgactgagcacggcggtcgcatcgtgaccaaccttatggacgcgacgcacgtcatcatg
gatgacgaggattcggcgcctgatctcagaccgaagcgcaagtacatcgtgaccccgagc
tgggtcgaggagtgcgtcgacgaggacacactggtggacgaagattccaagacttcccaa
acgcagtcagcgctgatgacgaagagtgagtaccagggaacagcagctccatcaaggtac
gacaggaggaagccgatccccaatctttcgggtgcggggctctcggtcggccatctccgc
cctggcgcccatatttcgacggccgcgcgcgagactatgtaa
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