Trichosporon asahii var. asahii: A1Q1_06097
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Entry
A1Q1_06097 CDS
T06566
Name
(RefSeq) hypothetical protein
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A1Q1_06097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_06097
03032 DNA replication proteins [BR:
tasa03032
]
A1Q1_06097
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
A1Q1_06097
mRNA cycle factors
Common to processing body (P body) and stress granule
A1Q1_06097
DNA replication proteins [BR:
tasa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
A1Q1_06097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN_4
EST1_DNA_bind
Motif
Other DBs
NCBI-GeneID:
25989609
NCBI-ProteinID:
XP_014176781
UniProt:
J5SGC9
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MTAKKTASEDNAAHPPPLGECGSHDLKLTAPRHRSRHDRDRRPHDRSKEFDRGLPASASR
RQLFDPSAPPVPRRSESSTRHPQPSPARDDRRPQPNGRRHLYDPDAPPLPPSPHRLPRQD
DGRHRNAGHHRLFDPALHDPVQFGRPPPDPATSPQLSVLRRPSPAHRTPEEEADRERERR
RRREGSERGSSHPSRRHNNSDTRSRGSRSSEGSESLRDRERGRGEGDSGAKAYLKASYKE
IGALEQSLGGMHRKMDSDPEAGISVLLDPSERNDPSRRNDINAWAELVSMHKKLADCHHH
FLKISLDPQVPPGLRQSPLRYNIPVRLWQVGFHLLLERLRFAWMSHNAIAHDLLTDFIYY
AYQFYNGLYEDDMLSSFRSAWIEALGDLARYRMAVACAEGDSKDAAKQKKAREARIDDGD
SDNEQPIPSGASIGQEVADNWDVEERETWRVTARDWYAKGIIEKPGEGRLHHHLALLCRD
VRGREGHALYHFTKSLCASHPFETSRESVLPLFDSALQYQRSAPEATAMDLFVRLHGMLF
TKIQLDDFSTVMSRFMERLEEDANLDGVSRKACVTQVDWLLMGVVNLTAMLQYGAESGPI
RKALAQEGAARRRQHIADGIAEQAEPDGDDDASQATEPVEEPPVLSDGPPPVTFTHALEL
AFTVLDFVFKHPFRQQGLYQVLNPYLTTLLTFLATIFRHPAAGAPLVTSMPWRHLADFLN
SQGLELREETRLVTPAPLPEDWMMRGMEWIGRRVYERGFWKTKSNSRGSSGGPAVPRSGE
RFQSEMDVLLANFDSGLDLNEGVVEDETADQTDGPVAVNERRRRRLAWAAGVLAAHVEGF
VIEDGRVAIRGVLAQVIDAQEAQRAREKAEADAWLARRPKDTEELSDSDDDDPALAVVRE
QRRHLRSVLKLPTGRSGGRKARTPKSTHRIVPGYTILVFDTNVLLGSLSLFARLVEGGQW
SVIVPLPVVTELDGLSRNPPPLGSEASSAVGYLEARIRTHALTLKIQTTRGNYLTDLLIR
AEHLDFKASVQNASKSMDDLILDVAAFQARHFQDRSGILGMPAPEDKATQVLLITFDRNM
RLKARARGIEAADERELATILGK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaagaagacagcgtcggaggacaacgcagcgcaccctcctcccctcggtgag
tgcgggtcgcacgacttgaaactgactgcgcccagacaccgatccagacacgatcgagac
cgtcgaccacatgatcgttccaaggagtttgatcgtgggctcccagcttcagcctctcgg
aggcagctgttcgatccgtcagcgccgccggtaccccgcaggtcagaatcgagcacacga
catccgcagccgtcgccggcgcgtgacgaccggcgaccccagccgaatggtcggaggcac
ctgtacgaccccgatgctccaccgctacctccgtccccacatcgtctgccgcggcaagat
gatggcagacaccggaatgccggacatcaccgtctattcgaccccgcactccatgatccc
gtgcaattcggccgacctccaccagaccctgcgacgtctccgcagttaagtgttttgcgt
cggccctcccccgcacacagaactccggaggaagaggcggaccgggaacgggagcgacgg
agacgacgggaagggagtgagcggggcagctcacatcctagtcgtcgccacaacaactcg
gatactcgcagtcgtgggagccgcagtagcgaaggcagcgagagcttgcgtgatcgggag
cgcggccgcggagaaggtgactctggcgctaaggcttacctgaaggccagctacaaggag
atcggcgcgctcgaacaaagcctcgggggcatgcaccgcaagatggactcggacccagaa
gcgggcatctccgtgcttctcgacccctcagagcgtaacgatccgtcacggcggaatgac
atcaacgcatgggccgagctggtcagcatgcacaagaagcttgccgactgccaccaccac
tttctcaagatctcgctcgacccacaggtaccccctggcctccgccagtccccgcttagg
tataacatccctgtccggctatggcaggttggcttccatttgctgctggagcgccttcgc
ttcgcctggatgtctcacaacgcgatcgcgcacgatctcctgactgatttcatctattac
gcgtaccagttctacaatggactttacgaggacgacatgctgtcctccttccgctctgcc
tggatcgaggcgctcggcgacctggcgcgataccgcatggcagtggcgtgcgctgaaggc
gacagcaaggatgccgccaagcagaagaaggcgcgagaggcgcggatagacgatggcgat
tcggacaacgagcagccaataccatccggcgctagtattgggcaggaggtcgcggacaat
tgggacgttgaggaacgcgagacatggcgcgtgaccgcccgagactggtacgcgaagggc
atcatcgagaagccgggcgaaggtcgcttgcaccaccacctggcgctgctctgccgcgac
gtgcgagggcgcgagggccacgcactgtaccatttcacgaagagtctctgcgcatcacat
ccgtttgagaccagccgtgagagcgtgctgcccttattcgactctgcgctgcaataccag
cgctctgcaccggaggccacggcgatggaccttttcgtacgcctgcacggcatgctgttc
acgaagatccagctcgacgacttttccacagtcatgtcgcgtttcatggagcgactggag
gaggacgcgaacctagacggtgtcagccgcaaggcatgcgtgacgcaggtcgactggctg
ctcatgggcgtcgtgaatctaactgcgatgctgcagtatggtgcagagagtgggccgatc
cgcaaggcgctcgcgcaggagggtgccgcgcgtcggagacaacacattgccgacggcatt
gctgaacaggccgagccggacggcgatgacgatgcgtctcaggcgaccgagccggtcgag
gagccgccagtactctccgacggccctcctccagtcacctttacgcacgcgctcgagctt
gcgtttaccgtcctcgactttgtcttcaagcatcccttccggcagcagggactgtaccag
gtgcttaacccgtacctcacaaccctcctgaccttcctcgcgacgatcttccgacaccct
gcggccggcgcaccgctcgtcacctcgatgccttggcgtcatcttgccgacttcttgaac
agccaggggctcgagctccgcgaggagacgcgcctcgtgacacctgcgcctctgccagag
gattggatgatgcgcggaatggagtggatcggccggcgggtctacgagcgcggattctgg
aagaccaaatccaactcacgcggttcgtccggtgggcctgcagtgccccgctcgggcgag
cggttccagagcgagatggacgtgcttcttgccaactttgactcggggctggacctcaac
gagggtgttgtcgaggacgagactgcggaccagaccgacggccccgtcgccgtgaacgag
cggcgccgccgccgtttagcctgggctgcgggcgtgctcgcagcgcatgttgagggtttc
gtcattgaggacgggcgcgtcgccatccgcggtgtgctcgcgcaagtcatcgacgctcag
gaggcgcagcgagcgcgcgagaaggccgaggcggacgcctggctcgcccgccggccgaag
gacacggaggagctgtcggacagcgacgacgacgaccccgcgctcgccgtcgtgcgcgag
caacggcgacacctgcgctcggtgctcaagctgcccacaggccggagtggcgggcgcaag
gcgcgcacgccgaagagcacccaccgcatcgtgccgggctacaccatcctggtgttcgac
acgaacgtactcctgggctctctgtcgcttttcgcccgcctggtggagggcggacagtgg
agcgtcatcgtcccccttcccgtcgtgactgagctcgacggcctcagtcgcaacccgccg
ccactcggcagcgaagcctcatccgcagttggctacttagaggcgcgcatccgcacgcac
gcgctcacgctcaagatccagacgacgcgcggcaactacctgaccgacctgctcatccgc
gccgagcatctcgacttcaaggccagcgtccagaacgcgagcaagagcatggacgacctc
atcctcgacgtcgcggcgttccaggcgcggcacttccaggaccgttccggcattctcggc
atgcccgcgccagaggacaaggcgacgcaggtgcttctcatcacgtttgaccgcaatatg
cgcctcaaggcgcgcgcgcgcggcatcgaggccgcagacgagagggagctggcgaccatc
ctgggcaaatag
DBGET
integrated database retrieval system
