Trichosporon asahii var. asahii: A1Q1_06696
Help
Entry
A1Q1_06696 CDS
T06566
Name
(RefSeq) ATP-dependent transporter
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tasa
Trichosporon asahii var. asahii
Pathway
tasa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1Q1_06696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tasa03019
]
A1Q1_06696
Messenger RNA biogenesis [BR:
tasa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
A1Q1_06696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
RsgA_GTPase
AAA_18
AAA_23
AAA_15
AAA_28
AAA_33
MMR_HSR1
AAA_13
AAA_22
Zeta_toxin
FtsK_SpoIIIE
SRP54
DUF3584
Motif
Other DBs
NCBI-GeneID:
25990208
NCBI-ProteinID:
XP_014183220
UniProt:
J5TQ19
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MATETNGSPELAIDCNNLTFAFKEGQEPVLDGITIQLPPGSRALLCGANGAGKSTLLRIL
AGKRLTKTRNCKILCQDGVVYLGTEWSSNPVVRSDIVVSHFLDSVGGWRHAERRDRLLEI
LDVDLDWHMHQISDGERRRVQLCMGLMGEWDVLLLDEVTVDLDVLVRADLIDFLVQESET
HATHIFDGLSAFPTHICHIQMGRTPRPMFKWTPGQQDLFQLALGWLREDRDVRRKHEADR
GRIRGPRTKSDTKDAKAFFEKYDYGQGK
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaaaccaacggctctcccgagctggccatcgactgcaacaacctcaccttt
gccttcaaggagggacaggagcccgtcctcgacggcatcaccatccagcttccgcccgga
agccgcgctctcctctgcggagcgaacggtgccggcaaatccaccctcctgcgtattctc
gcaggcaagcgcttgacgaagactcgcaactgcaagatcctctgtcaggatggcgtcgtt
tatctcggcacggaatggagctcgaatcccgtcgttcgttccgacattgtcgtttcgcac
ttcctcgactcggtcggcggctggcgccacgctgagcgccgtgaccggttgctcgaaatt
ctcgacgttgaccttgactggcacatgcaccagatctcggacggcgagcgccgtcgagtc
caactgtgcatgggtctgatgggcgagtgggacgttctgcttctggacgaggtcacggtt
gatctggacgtgcttgtccgtgcggacctcatcgacttcctcgtgcaggagagtgaaacc
cacgctactcacattttcgacggtctctcggcattcccgacccacatctgtcatatccaa
atgggccgcacgcctcgccccatgttcaagtggacccccggtcagcaggacctgttccag
ctcgcgctcggctggcttcgcgaggaccgcgacgtgcgccggaagcacgaggccgaccgc
ggcaggatccgtggtccccgcaccaaatccgacactaaggacgctaaggcgttctttgag
aagtacgactatggacagggcaagtag
DBGET
integrated database retrieval system
