Trinickia caryophylli: U0034_10155
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Entry
U0034_10155 CDS
T09722
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
tcar
Trinickia caryophylli
Pathway
tcar01501
beta-Lactam resistance
tcar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tcar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0034_10155
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0034_10155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcar02000
]
U0034_10155
01504 Antimicrobial resistance genes [BR:
tcar01504
]
U0034_10155
Transporters [BR:
tcar02000
]
Other transporters
Pores ion channels [TC:
1
]
U0034_10155
Antimicrobial resistance genes [BR:
tcar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
U0034_10155
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
U0034_10155
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
U0034_10155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WQE10185
LinkDB
All DBs
Position
1:complement(2269129..2270616)
Genome browser
AA seq
495 aa
AA seq
DB search
MPRRAPAAATAALVLSLLAGCAVGPDYQRPSAAVPASYKEAPPGWKVAQPADRADRGPWW
SIYEDARLDALMTKLDTANQSVAQFAAAYRQAHALVAEARAAYFPTLGLSGSATRSGQRL
SSSSGSSTFGSTTSRVSNSFSTSLDASWEPDLWGKVSRTVSAERAAEQGAAADLANARLS
AQATLAQTYFQLRALDSMQKLLDDTVKAFEEALRLTQNQYAQGVAARADVIQAQTQLQSA
QATAIDNGVARAQDEHAIAVLVGEPASTFSIPPTPLEAEPPEVPLELPTALLERRPDIAS
AERKTAAANEQIGVAIAAYFPSLTLSAQGGFQSSVLSNLLQLPSRFWSVGPSLAATLFDA
GLRRAQTEAARAAYDQQVATYRQTVLTAFQEVEDNLASQRILAREIIVQREAVASAKQAL
AIVTNQYKAGTVGYVSVLTAQTTAFSAEQKLATLAGQRMVSSVGLVKALGGGWSVAAGAA
DTASATGVAAGSAAR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccgcgcgccggctgccgccaccgccgcgctcgtgctgagccttctcgccggc
tgcgcggtcggcccggactaccagcgccccagtgccgccgtgcccgcgtcctacaaggaa
gcgccgcccggatggaaggtagcccagccggccgatcgcgccgatcgcggcccgtggtgg
tcgatctacgaggacgcacggctcgacgcgctgatgacgaagctcgatacggccaaccag
tcggtcgcccagttcgccgcggcctatcggcaggcgcatgccctcgtggccgaagcgcgc
gccgcctatttccccacgctcggtctgtccggcagcgccacgcgttcgggccagcgcctg
tcgagctcgtcgggttcgagcacgttcggcagcacgacgtcgcgcgtatcgaattcgttc
agcacgtcgctcgacgcatcgtgggagcccgacctctggggcaaggtgagccgcaccgtc
agcgccgagcgcgcggcggagcagggtgcagcggccgatctcgcgaatgcgcgcctgtcg
gcgcaggccacgctcgcacaaacctacttccagctgcgcgcgctcgattcgatgcaaaaa
ctgctggacgacacggtcaaagcgttcgaggaggcactccggctcacgcagaaccaatac
gcgcaaggcgtggccgcgcgagcggacgtgatccaggcacaaacgcagctccaatcggct
caggccacggccatcgacaacggcgtggcgcgcgcgcaggacgagcatgcgattgccgtg
ctcgtcggggaaccggcatccaccttttcgatcccacccacgccgctcgaagccgagccc
cccgaagtgccgctcgagctgcccaccgcgctcctcgagcgccggcccgatattgcgtcg
gccgagcgcaagacggccgccgccaacgagcagatcggcgtggcgatcgccgcctatttc
ccgtcgctcacgctctccgcacaaggcggcttccaaagctccgtcctttcgaatctgctc
cagttgccgtcgcgcttctggtccgtcggaccgtcgcttgcggcaacgcttttcgatgcc
ggcctgcgccgcgcgcagaccgaggccgcgcgtgcggcctacgatcagcaggttgccacc
taccggcagacggttctcacggcgttccaggaagtcgaagacaatctcgcgtcgcagcgc
atcctggcgcgcgagatcattgtgcagcgcgaagccgtggcctcggcgaagcaggcactc
gctatcgtcacgaaccaatacaaggcaggcaccgtcggctacgtcagcgtgctcaccgcg
caaaccaccgcgttctcggccgagcaaaaactggcaacgctggcggggcagcgcatggtg
tcgtcggtcgggctcgtgaaagcgctcggcggcgggtggagcgtggccgccggcgcggcc
gacaccgcctcggccacgggcgtggcggcaggctcggccgcgcgctga
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