Hydrogenovibrio crunogenus: Tcr_0453
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Entry
Tcr_0453 CDS
T00296
Name
(GenBank) Outer membrane protein, RND efflux system
KO
K12340
outer membrane protein
Organism
tcx
Hydrogenovibrio crunogenus
Pathway
tcx01501
beta-Lactam resistance
tcx01503
Cationic antimicrobial peptide (CAMP) resistance
tcx02020
Two-component system
tcx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Tcr_0453
09132 Signal transduction
02020 Two-component system
Tcr_0453
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Tcr_0453
01503 Cationic antimicrobial peptide (CAMP) resistance
Tcr_0453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcx02000
]
Tcr_0453
02044 Secretion system [BR:
tcx02044
]
Tcr_0453
01504 Antimicrobial resistance genes [BR:
tcx01504
]
Tcr_0453
Transporters [BR:
tcx02000
]
Other transporters
Pores ion channels [TC:
1
]
Tcr_0453
Secretion system [BR:
tcx02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Tcr_0453
RTX toxin transporter
Tcr_0453
Multiple protein transporter
Tcr_0453
RaxAB-RaxC type I secretion system protein
Tcr_0453
Antimicrobial resistance genes [BR:
tcx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Tcr_0453
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Tcr_0453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABB41049
UniProt:
Q31IH4
LinkDB
All DBs
Position
507254..508666
Genome browser
AA seq
470 aa
AA seq
DB search
MKATSAPCHFKARTAFLPLAIWVALFSSAEAASLDFKACVETALGQNPEMEVSEYRLKQA
EYALAESNANRMPQVTASFTGTNSNNALNVFGMKLSQRDAAFSDFGFNATSAAEFGAGNY
AYKPDDLNNPGSHSDFNSRLEVMIPVWNGGKVSSYQNQAKAMIKAAQHGDKAVQQYLTYS
VYQAYEGVHTARAFVSVTEQAVKASEAYVKTTQNLVDQGVVVRSELLSANVHLSEAKTAL
EKAKTQELIAKDNLKMLMAVDPNMPLEIGPRLDVSLPANSIEELTTMATSTNPKLEAQRE
EARSSRAAIDASKADQYPSFNIMARGEFNDDTVGFESSSYTVAGIVSWKITDFGITSNRV
NQARAAARQKQAALRSQENQTRLAVLKSWRTLKVAEKQVASNRLAVEQAEEAQRLIMKRY
KNGVSTMTEVLASQAQLDKARADLVQSIFEKNIHKAKLRLETGVMSIDQL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaacaagtgcaccgtgccattttaaagctcgcaccgcctttttacctttagcg
atatgggtcgcccttttctcttcagccgaagccgcatcacttgatttcaaagcctgtgtg
gaaacggcattaggtcaaaaccctgaaatggaagtgagtgaataccgactgaagcaagca
gaatacgcgcttgccgaatccaatgcgaatcgaatgccacaagtgaccgcttcttttacc
ggaacgaattcgaataatgctttgaatgttttcgggatgaaattaagtcaaagagatgcc
gcttttagtgactttgggtttaatgcaacatctgcggcggaatttggtgccggtaactat
gcatacaaaccagatgatttaaataacccaggttctcattcggattttaactcgcgccta
gaagtgatgattcccgtctggaacggtggcaaggtgtccagttatcagaatcaagccaaa
gcgatgattaaggccgcgcaacatggtgataaagcggttcaacaatacctgacctacagt
gtttatcaggcctatgaaggggtgcatactgcacgagcctttgtgtcggtaaccgaacaa
gccgttaaggcgtcggaagcctatgttaaaaccacgcaaaatttagtggaccaaggcgta
gtggttcgttcagaattgttgagtgcgaatgtgcatttgtcggaagcaaaaacggctttg
gaaaaagcgaaaacacaagagttgattgcaaaagacaatttaaaaatgttgatggcggtg
gatcctaatatgcctttggaaatcggtccccgacttgatgtgtcattgccggctaattca
atagaagaattaacgaccatggcaacgtcaaccaaccctaaactagaagcgcagagagaa
gaagctcgttctagtcgcgccgcgattgatgccagcaaagccgatcaatatcccagtttc
aatattatggcaagaggagaatttaacgatgataccgttggttttgaaagttcttcttat
acggtggccggtatcgtatcgtggaaaattaccgactttggaattacgtccaatcgagtt
aatcaagctcgagcggccgctcgacaaaaacaggcggctttacgttcgcaagaaaatcaa
acccgtttagccgttctaaagtcatggcgcacattgaaggtagctgaaaaacaagtggct
tctaatcgcctggcggttgagcaagctgaagaagcgcaacgcttaattatgaagcgatat
aaaaacggtgtttcgacgatgacagaagtcttggctagtcaagcacaactggataaagcc
agagcggatttggttcaatcgatttttgaaaaaaacattcataaggcgaaattgcgctta
gaaaccggtgtgatgagcattgatcaactataa
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