Hydrogenovibrio crunogenus: Tcr_1304
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Entry
Tcr_1304 CDS
T00296
Name
(GenBank) Type I secretion outer membrane protein, TolC
KO
K12340
outer membrane protein
Organism
tcx
Hydrogenovibrio crunogenus
Pathway
tcx01501
beta-Lactam resistance
tcx01503
Cationic antimicrobial peptide (CAMP) resistance
tcx02020
Two-component system
tcx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tcx00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Tcr_1304
09132 Signal transduction
02020 Two-component system
Tcr_1304
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Tcr_1304
01503 Cationic antimicrobial peptide (CAMP) resistance
Tcr_1304
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tcx02000
]
Tcr_1304
02044 Secretion system [BR:
tcx02044
]
Tcr_1304
01504 Antimicrobial resistance genes [BR:
tcx01504
]
Tcr_1304
Transporters [BR:
tcx02000
]
Other transporters
Pores ion channels [TC:
1
]
Tcr_1304
Secretion system [BR:
tcx02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Tcr_1304
RTX toxin transporter
Tcr_1304
Multiple protein transporter
Tcr_1304
RaxAB-RaxC type I secretion system protein
Tcr_1304
Antimicrobial resistance genes [BR:
tcx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Tcr_1304
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Tcr_1304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
EPO_TPO
Motif
Other DBs
NCBI-ProteinID:
ABB41899
UniProt:
Q31G24
LinkDB
All DBs
Position
complement(1421714..1423054)
Genome browser
AA seq
446 aa
AA seq
DB search
MIPNLTAALMLVSSTAWSAPGLIDIYQMAVLHDAKLAQARATYQANQQALNIARSPLLPQ
IAANANYVKNDSNVDTADVTTRELGVSMTQSLYQHDNWARYSQAKYQMQKAEYQIKFAEQ
DLIVRVSDAYFKVLLAQEDVKLAQAKEEADKTQWERAQASAEVGLASKTDVLQAKSSYDL
SKSQRITSENNLDVAYEELMKLTGKPISELKVIKLNVDLPAQNLNMSKWENMAEEQNLDV
LQVEESANVASKEVEVQKSGHWFNVDLKAQYTDQSYSDFNAIYPGQYSDRNNLMVGVYAT
LPLYSGGGVSAKVSEARANYKAATLGLRDAKESARLNARIQVRNVERGMELVMANRAAVL
SNDAFLEAAEEGYKVGLKNLLEVLTARTNMFQARRNLAESLHNVVLSRLKLEATVGRLTA
DKLVQFDKVLSNPTNEKMPKLEKTSS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgattcctaatttaacagccgctttgatgttggtttcgtcgacagcatggtctgctccc
gggttaattgatatttatcagatggctgtgttacatgatgcgaaactggctcaagctcgg
gcgacttaccaagcaaaccagcaagcattaaacattgcgcgttcgcctttattacctcag
attgccgccaatgccaattacgttaaaaatgacagtaatgttgataccgctgacgtcacc
actcgtgagttaggggtgagtatgacgcagtcgttgtatcagcatgataattgggcgcgt
tattcgcaagcaaaatatcagatgcaaaaggctgaatatcaaatcaagtttgcagaacag
gatttgattgtgcgtgtttcagatgcgtattttaaggtgctgttggcacaagaagatgtc
aagctggctcaggcaaaagaagaagccgataaaacccaatgggaaagagcacaggcttct
gcggaagtggggcttgcaagtaagaccgatgtgttacaggctaaatcgagttatgactta
tccaagtctcaacgcatcacttctgaaaataatctggatgtggcctatgaagagctgatg
aagctcactggcaaaccgatcagtgaattgaaagtcattaagctgaatgttgatttaccc
gcacaaaatctaaatatgagcaaatgggaaaacatggcggaagagcaaaacttagatgtt
cttcaggtggaagaaagcgcgaatgtggcctcaaaagaagttgaagtgcaaaagtccggc
cattggtttaatgtcgatttgaaagcgcaatataccgatcaatcctattctgatttcaat
gccatttaccctggacaatattcggatcgaaataatttaatggtgggggtttatgcgacc
ttgcctttgtattccggtggcggtgtcagtgccaaagtgtctgaagccagagccaattat
aaagcggccactttaggcttgcgtgatgcgaaagagtctgctcgtctgaatgctcgtatt
caggtgcgcaatgtcgagcgcggtatggaattggtaatggcgaaccgagccgccgtgttg
tcaaacgatgcgtttttagaagcggcggaagaaggatataaagtcggcttaaagaacttg
ctggaagttttgacggcgagaaccaatatgttccaagccagaagaaacttggctgaatcg
ctgcataatgtggtgttaagccgattgaaactggaagctacagtgggacgtttgacagct
gacaagttagtgcagtttgataaagtgctttcgaatccgacgaatgaaaagatgccgaaa
cttgaaaagacatcctcatag
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