Thalassotalea fonticola: RI844_06780
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Entry
RI844_06780 CDS
T10167
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
tft Thalassotalea fonticola
Pathway
tft01501
beta-Lactam resistance
tft02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tft00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RI844_06780
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RI844_06780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tft02000
]
RI844_06780
01504 Antimicrobial resistance genes [BR:
tft01504
]
RI844_06780
Transporters [BR:
tft02000
]
Other transporters
Pores ion channels [TC:
1
]
RI844_06780
Antimicrobial resistance genes [BR:
tft01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RI844_06780
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RI844_06780
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RI844_06780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
WOH38918
LinkDB
All DBs
Position
1674677..1676200
Genome browser
AA seq
507 aa
AA seq
DB search
MSNLSLKPSYLVLATVILSGCAIGPDYQKAPEVTPEELPSWQFDNDAAQAGTSMATLNWQ
SFYQDPALQRFIQQALDNNIDLKIASERVYRAQIGLVESDSQFLPNFDLTFDADREKTSK
ALTSDPKIDNEFKLTANVSWELDLWGKLRRSNEADIANLQAMQADFYGSRISLIAQVAEL
YYKIQDAQNQIQLTNNNILARERSKRITELRHQQGIISGLDVSQSNVELMQEKLKLPALH
NSLNSSMYQLSILLDQSPKKLEIPARNPNNLDRESLPVGLPSELLKRRPDVISQERKLHA
ATAAIGVAQADYFPNISLVGNFGAKSLEIDDLLDDAEYWEIGADISMPLFNWGTTTANVD
KVTSEYREAILNYRKAIFVSFRESAEAIENVDKNRTEYYLKRDLLSATNEYLRIANLRYS
NGVIGYIDVLDAQRNQAKSQQDFSSAAESLQTSFVGLYKALGGGWDAAGYQQALNNVEDI
DSAVEQQSNVINNQMPVVPQTAEMPEN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacctatcattaaagccaagctatttagtgcttgcaacagtcatattatcaggt
tgtgctattggccctgactatcaaaaagcgcctgaagtaacaccagaagaattaccttca
tggcaattcgacaatgatgctgcgcaggcaggtacctcgatggcaacattgaattggcaa
tcattttatcaagacccggcattgcaacgcttcattcaacaagcactagacaataatatt
gacctaaaaattgccagcgaacgggtgtaccgcgcacaaataggtttagtggaaagtgac
agccagtttctaccaaattttgatctgacatttgacgccgatcgtgagaaaaccagtaaa
gcattaacctcagatccaaaaatagacaatgaatttaaattgacggctaatgtatcgtgg
gagcttgacctatggggaaaattgcgtcgcagcaatgaggccgacatcgccaatttacag
gcaatgcaagccgatttttacggttcaagaatatcattgatcgcgcaagttgcagagctg
tattataaaattcaagatgctcaaaatcagatacagctaaccaataacaatattctcgct
cgtgaacgatcgaaacgaataactgaattacgacaccaacaaggtattatttctggattg
gatgttagtcaaagtaatgtggaattaatgcaagaaaagctgaaattgccagcattgcac
aactcgctcaactcaagcatgtaccaactgtcaatattgctcgatcagtcccctaaaaaa
cttgagatccctgctcgcaatccgaacaatttagatcgagaatcgctgcctgtagggtta
ccatctgaattattaaaacgtcgtcctgatgttatctcgcaagagcgcaagcttcatgca
gcaaccgcggcaataggagtagcacaggccgattatttccctaacatcagcttagtcggt
aactttggcgctaaaagtttagaaatagatgacctgctcgacgatgcagaatattgggaa
ataggtgcagatatttcgatgccgttatttaattggggaacaacaaccgcaaatgttgat
aaagttacctctgaatatcgtgaagctatcctcaattatcgtaaagctatatttgtttcc
tttagagagtcggctgaagccattgaaaatgtggataaaaaccgtactgaatattactta
aaacgcgatcttctaagcgcaactaatgagtatctacgtatcgcaaatttacgttacagt
aatggtgtgatcggttatatcgatgtacttgatgcacagcgaaaccaggctaaatcacaa
caagatttttcatcagctgccgaaagtttacaaacatcatttgtaggcctttataaagcg
ttaggaggtggttgggatgcagcaggttatcagcaagcattaaataatgtagaagatatc
gacagcgcagtagagcaacaaagcaatgttattaataaccaaatgccggtagtgccgcaa
acagctgaaatgcccgaaaattaa
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