Taeniopygia guttata (zebra finch): 100218575
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Entry
100218575 CDS
T01082
Name
(RefSeq) interstitial collagenase
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
tgu
Taeniopygia guttata (zebra finch)
Pathway
tgu03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tgu00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
100218575
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tgu01002
]
100218575
Enzymes [BR:
tgu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
100218575
Peptidases and inhibitors [BR:
tgu01002
]
Metallo peptidases
Family M10
100218575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Reprolysin_4
Peptidase_M54
Peptidase_M66
DUF4953
Metallopep
Motif
Other DBs
NCBI-GeneID:
100218575
NCBI-ProteinID:
XP_002198044
Ensembl:
ENSTGUG00000012737
LinkDB
All DBs
Position
1:complement(39497531..39504956)
Genome browser
AA seq
468 aa
AA seq
DB search
MRMKTFAILLSIYVCVSSAFPVAPEAEDEGKTLQLVESYLQNFYDLQKGHHPHLRSGGEN
PLAAKLKEMQSFFGLEVTGKPDPDTLEVMKKPRCGVPDVEQYAFTPGNPKWKRNNLTYRI
LNYTPKMRRADVDEAVRRALSVWSNVTPLTFQKVEGEIADIMISFAYRDHRDNSPFDGPN
GQLAHAFQPGEGLGGDVHMDEEEAWTKDGRGYNLFIVLAHELGHSLGLSHSNDPGALMYP
TYSYTDPSEFRLPQDDIDGIQAIYGRANAAVQPTGPITPEACDPNLTFDSITTLRGEIFF
FKGRYMLRKHPERTETELNFISLFWPRLPSGIQAAYENVETDEITIFKEDKYWVIRGYDV
LPGYPKPIYRFGFPKTVKRVNAAYNDEATGKTYFFVADRYWRYDENKKSMDHGYPRKIVS
DFGNIGRVDAAFQKDGYVYFFHGTTQFQFDPRAKRIVQQMKSTSWFNC
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaagacctttgcaattctcctgtcaatatatgtgtgtgtctcctctgcattt
cctgtggctccagaagcagaagatgaaggaaaaaccctgcagcttgtagagagttatcta
cagaatttctatgaccttcaaaagggtcaccatccacatttaagaagtggtggtgaaaac
cctcttgctgcaaaactcaaggaaatgcagtcattcttcggactagaagtgactggaaaa
cctgatcctgacacattggaggtgatgaaaaaacccagatgtggtgtacctgatgtggag
caatatgcattcacaccagggaatcccaaatggaaaagaaataatctgacatacaggatt
ttgaattacaccccaaagatgagacgagctgatgtagatgaagcagtcagaagagctctc
agtgtctggagcaacgtgacaccattgacattccaaaaggttgagggcgaaatagcagat
ataatgatctcttttgcttatagagaccaccgtgacaattctccttttgatggtcccaat
ggacagctggctcatgcattccagcctggtgaaggtcttggtggagatgtgcatatggat
gaggaggaagcttggacaaaagatggaagaggatacaatttgttcattgttcttgcccat
gagcttggccattcactgggtctgtctcattcaaatgatcctggagcactgatgtatcca
acttactcctacaccgaccccagtgaattccgtcttcctcaggatgacattgatggaatt
caggccatctatggacgggctaatgctgctgtgcagccaacaggacccataactccagaa
gcgtgtgacccaaatctgacatttgattctattactaccctacgtggagaaatattcttc
ttcaagggcagatacatgctgcgcaaacatcccgaaaggacagagacagagctcaatttt
atctcactgttctggccaaggttaccatcaggaattcaagctgcttatgaaaacgttgag
actgatgaaattacaatttttaaagaggataaatattgggtcatcaggggatatgatgtt
ctacccggctatcccaaaccaatctatcgctttgggttcccaaagactgttaaaagagtt
aatgcagcttacaatgatgaagccacagggaaaacatacttctttgtagctgacagatac
tggagatacgatgaaaacaaaaaatccatggatcatgggtatcccaggaaaatagtctct
gactttggaaacattggcagggttgatgctgctttccagaaagatggctatgtgtacttc
ttccatggaacaacccagttccagtttgatcctcgtgccaaacggattgttcaacaaatg
aagagcaccagctggtttaattgttaa
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