Thalassospira marina: CSC3H3_09085
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Entry
CSC3H3_09085 CDS
T05224
Name
(GenBank) type I secretion protein TolC
KO
K12340
outer membrane protein
Organism
thac
Thalassospira marina
Pathway
thac01501
beta-Lactam resistance
thac01503
Cationic antimicrobial peptide (CAMP) resistance
thac02020
Two-component system
thac03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CSC3H3_09085
09132 Signal transduction
02020 Two-component system
CSC3H3_09085
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CSC3H3_09085
01503 Cationic antimicrobial peptide (CAMP) resistance
CSC3H3_09085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thac02000
]
CSC3H3_09085
02044 Secretion system [BR:
thac02044
]
CSC3H3_09085
01504 Antimicrobial resistance genes [BR:
thac01504
]
CSC3H3_09085
Transporters [BR:
thac02000
]
Other transporters
Pores ion channels [TC:
1
]
CSC3H3_09085
Secretion system [BR:
thac02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CSC3H3_09085
RTX toxin transporter
CSC3H3_09085
Multiple protein transporter
CSC3H3_09085
RaxAB-RaxC type I secretion system protein
CSC3H3_09085
Antimicrobial resistance genes [BR:
thac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CSC3H3_09085
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CSC3H3_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF503
Motif
Other DBs
NCBI-ProteinID:
AUG52842
LinkDB
All DBs
Position
1992170..1993528
Genome browser
AA seq
452 aa
AA seq
DB search
MIKRFLLTCSILATAGVISTGASAETLDDALAKAYQSNPTLEAGRAQLRATDEEISQALS
NWRPTVQLNGSAGIRKLDVDTDQAATTRDSTLNPYEVGLNVSQPLYRGGRTEAETERADA
RIKSQRAGLRSTEQTVFLNVATAYFNVLRDTAVVELNQNNIRVLERQLEATRDRFSVGEV
TRTDVSQGEARLAGAKADLIAAQGTLANTRAVYERLVGNAPTDLKIPDPLGGLPTSVKQV
IETASAQHPDVLQAQFSEDAAHDDIRLSEGALYPVVSLSAGVSRSSEASSEDTTTDTAEV
LAEVTVPIYQQGAEYSSIRAAKQTAGQARLVVDQTRREVIESATSAWENLVTARASIESQ
QAEVSAAEVALDGVQREASVGSRTVLDVLDQEQELLQARVSLVQSRRDAAVAEFQVKAAI
GALNAQVLGLPVEIYDVEQNYNKVKDQLWGSD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacggttcttgctcacctgtagcattctggcgactgccggtgtgatctctacg
ggggcgtctgctgaaaccctcgatgatgcgcttgccaaagcatatcagagcaatccgacc
ctggaagccggacgggcacaattgcgtgcgaccgatgaagaaatctcccaggctctttcc
aattggcgtcctactgttcagttgaacggcagtgccggtattcgcaagcttgacgtcgat
accgaccaggccgcgacgacccgcgattcgacgctgaacccctatgaggtcggtctgaat
gtcagccagccgctttatcgtggcggccggaccgaagctgaaaccgaacgggccgatgcg
cgcatcaaatcgcagcgtgcaggtcttcgttcgacggaacagacagtatttttgaatgtt
gccacggcttatttcaacgttctgcgggataccgccgttgttgaactcaaccagaacaac
attcgcgttcttgagcgccagcttgaagcaacccgtgaccgtttctcggtgggtgaagtt
acccgtaccgacgtttcgcagggtgaagcccgccttgccggcgccaaggccgacttgatc
gcagcccagggtacgcttgcaaatacccgtgcggtatatgaacgccttgttggcaatgcc
ccgaccgatctgaaaattccggatccgctcggtggtctgccgaccagcgtcaagcaggtg
attgaaaccgccagtgcccagcaccccgatgttctgcaggcgcagttctcggaagatgct
gcacatgacgatatccgactgagcgaaggtgccctttatccggtcgtcagcctgagcgcg
ggcgtttcgcgcagcagcgaggcgtcttcggaagacaccacgaccgatacggccgaagtt
ctggccgaagtaacggttccgatctatcagcagggtgcggaatattccagcatccgcgca
gccaagcagacagccggtcaggcccgtctggttgtggatcagacccgtcgtgaagttatc
gaaagcgcaaccagcgcttgggaaaatcttgtaacggcacgtgccagcatcgaaagccag
caggctgaagtttcggctgctgaagttgctcttgatggtgttcagcgcgaagcgtctgtt
ggttcgcgtaccgttcttgacgttcttgaccaggaacaggaactgctgcaggcacgtgtg
tcgctggtgcagtcacgccgtgatgccgcagttgccgaattccaggttaaagccgcaatt
ggcgccctgaacgcacaagttcttggtttgccggttgaaatttacgatgtcgaacagaac
tataataaagttaaggatcaattgtggggatctgattga
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