Thalassospira marina: CSC3H3_21240
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Entry
CSC3H3_21240 CDS
T05224
Name
(GenBank) hypothetical protein
KO
K12340
outer membrane protein
Organism
thac
Thalassospira marina
Pathway
thac01501
beta-Lactam resistance
thac01503
Cationic antimicrobial peptide (CAMP) resistance
thac02020
Two-component system
thac03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CSC3H3_21240
09132 Signal transduction
02020 Two-component system
CSC3H3_21240
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CSC3H3_21240
01503 Cationic antimicrobial peptide (CAMP) resistance
CSC3H3_21240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thac02000
]
CSC3H3_21240
02044 Secretion system [BR:
thac02044
]
CSC3H3_21240
01504 Antimicrobial resistance genes [BR:
thac01504
]
CSC3H3_21240
Transporters [BR:
thac02000
]
Other transporters
Pores ion channels [TC:
1
]
CSC3H3_21240
Secretion system [BR:
thac02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CSC3H3_21240
RTX toxin transporter
CSC3H3_21240
Multiple protein transporter
CSC3H3_21240
RaxAB-RaxC type I secretion system protein
CSC3H3_21240
Antimicrobial resistance genes [BR:
thac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CSC3H3_21240
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CSC3H3_21240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Fer4_24
DUF7518
Motif
Other DBs
NCBI-ProteinID:
AUG55402
UniProt:
A0A2N3KML3
LinkDB
All DBs
Position
pCSC3H3:211153..212571
Genome browser
AA seq
472 aa
AA seq
DB search
MVLKKKILVSAYVLGISAIGLTDRAGAEDLSTVYQMAMTENPNISLAEEQVSEGVASQVN
AFMGYLPQVSATFDREWVKQRIDRSDNTVFALGKGNFDNRQRTFQLQQHIFDFETIMDIV
ASDMGRMRLKKSLETAKLDVGYQTIEAYLSTLAAADDARLAQIEHASMAERKVDIDTRQK
QGLATSYESDLVAARLAEAEARVVATRTSYQRAFAQLQRRVGSLPASLATLAHNVELPKL
AETDVDHWLEAALKSSPRVRAMDYSIDERKAALAADVGQALPTFDFIFTDTRRDSGGSLF
GGGSLTHEGVAMLRLNVPLFNPGGRGYEALETRSQVDQARYQRAIYLRELRETVTGTINE
LVNGPDRIKALVKGVETHRRIVDAVKIKFDAGQSTVLDVLDEDEDLFAMERQALAAIYSH
LLNYALIHQVTGTLDDAQIASINQLLDPNLPMITASTDFATYSHDTMPISVQ
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgaaaaagaaaatcctcgtttcggcgtatgtgctggggatctctgctatcggt
ttaacggatcgtgctggggcagaagatctttcaaccgtctatcagatggcaatgaccgaa
aacccgaatatctcgctggccgaagaacaggtcagtgaaggtgtcgcaagccaggtcaat
gctttcatgggctatttgccgcaggtatcggcaacctttgaccgcgaatgggtcaaacag
cgtattgaccgttcggacaataccgtgtttgcacttggtaaaggcaatttcgataaccgc
cagcgtaccttccagctgcagcagcatatctttgattttgaaaccatcatggatatcgtg
gcatcggatatgggccgcatgcggttgaaaaaatcgcttgaaaccgccaagcttgacgtt
ggctatcagacgattgaagcctatctcagcacgcttgcagcagctgacgatgcccgtctg
gcccagatcgaacatgcctcgatggctgaacgcaaggtcgatatcgacacccgccagaaa
cagggtctagcaacgtcctatgaatcggacctggttgctgcccgcctggccgaagccgaa
gcccgcgttgttgccacccgcacctcctatcagcgtgcctttgcccagttgcagcgccgc
gttggcagcctaccggcatcgctggcaaccctggcacacaatgtcgaactgccgaaactg
gcagaaaccgatgttgaccattggctggaagccgcattgaaaagcagcccgcgtgtgcgt
gcgatggattattccatcgatgaacgcaaagcagcccttgctgccgacgttggccaggcc
ctgccgaccttcgatttcatctttaccgatacccgccgtgattccggtgggtcgctgttt
ggtggcggcagcctgacccatgaaggtgtggcgatgctgcgcctgaatgtgccgctgttc
aacccgggtggccgtggttacgaagcccttgaaacccgcagccaggtggaccaggcccgt
taccagcgtgccatttacctgcgtgaactgcgcgaaacggttaccggcaccatcaatgaa
ctggtaaacggcccggaccgcatcaaggcgctggtcaaaggtgttgaaacccaccgtcgt
attgttgatgccgtcaaaatcaaatttgatgctggccagtcaaccgttctcgatgttctt
gacgaagacgaagacctgtttgccatggaacgccaggcgcttgccgcgatctatagccac
cttctgaactatgccctgatccatcaggttaccggcacgctggacgatgcccagatcgca
tcgatcaaccagcttctggatccgaacctgccgatgattaccgcaagcaccgactttgcg
acctacagccacgacacgatgccgatttcggttcagtaa
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