Thalassotalea sp. PS06: FNC98_13470
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Entry
FNC98_13470 CDS
T06100
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
thap
Thalassotalea sp. PS06
Pathway
thap01501
beta-Lactam resistance
thap01503
Cationic antimicrobial peptide (CAMP) resistance
thap02020
Two-component system
thap03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
thap00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FNC98_13470 (tolC)
09132 Signal transduction
02020 Two-component system
FNC98_13470 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FNC98_13470 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
FNC98_13470 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thap02000
]
FNC98_13470 (tolC)
02044 Secretion system [BR:
thap02044
]
FNC98_13470 (tolC)
01504 Antimicrobial resistance genes [BR:
thap01504
]
FNC98_13470 (tolC)
Transporters [BR:
thap02000
]
Other transporters
Pores ion channels [TC:
1
]
FNC98_13470 (tolC)
Secretion system [BR:
thap02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FNC98_13470 (tolC)
RTX toxin transporter
FNC98_13470 (tolC)
Multiple protein transporter
FNC98_13470 (tolC)
RaxAB-RaxC type I secretion system protein
FNC98_13470 (tolC)
Antimicrobial resistance genes [BR:
thap01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
FNC98_13470 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
FNC98_13470 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QDP02261
UniProt:
A0A516HER5
LinkDB
All DBs
Position
3062104..3063525
Genome browser
AA seq
473 aa
AA seq
DB search
MTNKLNSLFVGVVLACTSSVVAAEDLKEIYQLALANDPTVQKAKAQYLASEERITQARSV
LLPQVNGSAGYTSSSQESPSILSTIAGVEEEFRVTTDRDVFDYGLSLSMQLYHHNSWITL
ETSKKAAHQFDLNYQFAKQQLITRVTTAYFDVLAAQDGLEFAIAEKNAIERQLEQTKQRF
SVGLTAITDVHEAQAQYDNSVAEEIRAQNAVYQAEEILREITGKYPRELDTLNTERFSAV
MPTPGSADSWQQLAEAKNLQLINQKVAVDIAKENIDLAFSGHLPTLSLSGSYGFSSTDQD
NDPTVFPGTDISTGQTLSGSETDTNSIGVQLNVPIFSGLRTSAEVDEAKHLYVSANQDLQ
ITYRAVVRESRSAYNTIVATISGVKAFEQSVISAESALKATEAGFEVGTRTIVDVLDSTR
NLYNAKRNLSTTRYQYIINMLLLKEAAGTITEEDINTINAGLQEARPIDPDNV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataaactgaattctttatttgtcggcgtggtgctggcgtgtacgagctccgtt
gtcgctgccgaagatttaaaggaaatttatcagttggcattagccaatgatccaactgtt
cagaaagcaaaagcacaatacttggccagtgaagagcgcattactcaggctcgctccgta
ttattgcctcaagttaatggctcggctggttacacatcaagttcacaagaaagtccgtca
attttatccaccattgctggtgttgaagaagagtttcgagttaccacagatcgagatgta
ttcgattatggcttgagccttagtatgcagctttatcatcacaacagctggataacctta
gaaacatcaaaaaaagccgcgcaccagtttgacctgaactaccagtttgccaaacaacaa
ctcatcactcgagtgactaccgcatactttgatgtattggcagcgcaagatggtttagaa
ttcgcaattgcagagaaaaatgcgattgagcgtcaattagagcaaactaagcagcgtttc
tctgttggtttgacagcaattaccgatgtgcacgaagcacaagcccaatacgataactcc
gtagctgaagaaattcgtgcgcaaaatgcggtttatcaggcggaagaaatccttcgtgag
attaccggtaagtacccacgtgaattggataccctcaatactgagcgtttcagtgcggtt
atgccaacccctggttctgccgatagctggcaacaattagctgaagcgaaaaacctacag
ctaatcaatcaaaaagttgctgttgatatcgctaaagaaaacatcgatttagctttttct
ggtcacttaccaacgttgagcttgtcaggaagctacggattctcttcaacggatcaagat
aatgatccaaccgtattcccgggcaccgatatctcaacaggacagaccctaagtggtagt
gaaacggatacgaattcaattggcgtgcaattaaacgttcctatcttctctggtcttcgc
accagcgctgaagtagatgaagcgaaacacctgtatgtttctgccaatcaggacctgcaa
attacttaccgcgcggttgtacgtgaatcacgtagtgcatataacaccatcgttgctacc
atctcaggtgtgaaagcatttgaacaatcggtaatttcagctgaaagtgcattgaaagca
acagaagccggttttgaagtaggtacccgtaccatcgtcgacgtattagatagtactcgt
aatttgtacaacgccaagcgtaacctttctaccacccgctatcagtacatcatcaatatg
ttactgctaaaagaagcagccggtaccattaccgaagaagacatcaataccatcaatgct
ggtttgcaagaggcaagacctattgatccggataacgtctaa
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