Thiomicrorhabdus lithotrophica: NR989_06150
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Entry
NR989_06150 CDS
T09486
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
tlh
Thiomicrorhabdus lithotrophica
Pathway
tlh01501
beta-Lactam resistance
tlh01503
Cationic antimicrobial peptide (CAMP) resistance
tlh02020
Two-component system
tlh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NR989_06150
09132 Signal transduction
02020 Two-component system
NR989_06150
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NR989_06150
01503 Cationic antimicrobial peptide (CAMP) resistance
NR989_06150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlh02000
]
NR989_06150
02044 Secretion system [BR:
tlh02044
]
NR989_06150
01504 Antimicrobial resistance genes [BR:
tlh01504
]
NR989_06150
Transporters [BR:
tlh02000
]
Other transporters
Pores ion channels [TC:
1
]
NR989_06150
Secretion system [BR:
tlh02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NR989_06150
RTX toxin transporter
NR989_06150
Multiple protein transporter
NR989_06150
RaxAB-RaxC type I secretion system protein
NR989_06150
Antimicrobial resistance genes [BR:
tlh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NR989_06150
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NR989_06150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WEJ61595
LinkDB
All DBs
Position
complement(1331385..1332746)
Genome browser
AA seq
453 aa
AA seq
DB search
MKNSKKVNAYKTFTKSILVGSILAVSSQQVLGASLGLTDVYQMALTHDAQLAQAESQYQA
DMQGLDTALATLLPQIKADGSYFVTDSSNDSFDVNTQSLSLTLDQSLYRHENWAQYEKSK
YLVESAEATLKNSQQDLIIRVTEAYFDVLLAQETLRLAITKEAADATQLETAEASAELGL
LSRVDVLQAKSSYDLSKSETINAENGLDVSLEALSKLTGQPADTLENRSLKKLLPDVMLP
RENLSMSTLEQRAVVENLLVKQAQAKLSTANQEIDVQRGGYWPTVDLQAKYTDTAYSDFQ
AGSSFIDSDNTSVGVRVSMPLYSGGSTSSRVAAAKYQSIASQQALREAQENARLNVRTQK
LNLDRGQKLVAALREAVKSNDAFLESAEEGYKVGLKSLLEVLTARTNQNTAQKNLIEAIH
NQVLNKLRLEASLGDLTIEDIQKYEPLLQTASK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacagtaagaaagttaacgcttataaaacatttactaaatccatattagttgga
tcaattctagccgtttccagccagcaagttttaggcgcttcgctagggttgacggacgtt
tatcaaatggcacttacgcacgacgcacagctagcgcaagctgagtcacagtatcaagct
gatatgcaggggttggatacagccctagcgacgcttttgccgcaaattaaagcggatggc
agttattttgtgaccgatagtagcaatgatagttttgatgttaatactcaatcgctttct
ttgacacttgatcaatcactatatcgacatgaaaattgggcgcagtatgaaaaatctaaa
tatttggtggagtcagcagaagcgacgctaaaaaactcacaacaagacttaattattaga
gtaactgaggcttattttgatgttttgctagctcaagaaacgctcaggttagctataaca
aaggaagcggctgatgctactcagctagaaactgcagaagcttcagcagaacttggtcta
ttaagtagggttgatgtattgcaggcaaagtcgagttatgacttgtctaaatcagagacc
attaacgctgaaaatggtctagatgtttcgttagaagcgctttctaaactgaccggtcag
ccagctgatacattagaaaaccgtagtttaaaaaaactcttgcctgatgtgatgttaccg
cgtgaaaacctatctatgtcaacccttgaacaacgtgccgtagtggaaaacttgttagtt
aagcaagcccaagctaagctttcaacggctaatcaagaaattgatgtacagagaggcggc
tattggccaacagttgatttgcaagctaagtacaccgataccgcttattctgactttcag
gccggaagcagttttattgactctgataatacctctgttggtgtgagagtttctatgcct
ttatattctggaggttcaactagttcaagggtcgctgctgctaaataccaaagtattgct
tctcagcaagcgcttcgtgaagcgcaagaaaatgccagattgaatgtgagaacccaaaaa
ctgaatttagatcgcggacaaaaattagttgcggcattgcgtgaagcagtgaaatctaac
gatgcgtttttagaatcggcagaagaggggtataaagttggtttaaaaagcttacttgag
gtgttaacggcccgaaccaatcaaaatacagcccagaaaaatttaattgaagcgatacac
aatcaggtgcttaataaattaagattagaagctagtttaggtgatttgacgatagaagat
atccaaaagtatgagccgcttcttcaaacggctagcaagtaa
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