Thiomicrospira microaerophila: JX580_05570
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Entry
JX580_05570 CDS
T08259
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh01501
beta-Lactam resistance
tmh01503
Cationic antimicrobial peptide (CAMP) resistance
tmh02020
Two-component system
tmh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JX580_05570
09132 Signal transduction
02020 Two-component system
JX580_05570
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JX580_05570
01503 Cationic antimicrobial peptide (CAMP) resistance
JX580_05570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmh02000
]
JX580_05570
02044 Secretion system [BR:
tmh02044
]
JX580_05570
01504 Antimicrobial resistance genes [BR:
tmh01504
]
JX580_05570
Transporters [BR:
tmh02000
]
Other transporters
Pores ion channels [TC:
1
]
JX580_05570
Secretion system [BR:
tmh02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JX580_05570
RTX toxin transporter
JX580_05570
Multiple protein transporter
JX580_05570
RaxAB-RaxC type I secretion system protein
JX580_05570
Antimicrobial resistance genes [BR:
tmh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JX580_05570
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JX580_05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UQB43335
LinkDB
All DBs
Position
complement(1158501..1159841)
Genome browser
AA seq
446 aa
AA seq
DB search
MKKINSICYLNVMRSTSLVSVAIAASISFASFVAQAKAPGLVDVYQMSVLHDAKLAQARA
SFDADREVITQARSLLLPTVNASAVYSHPDLRESSSRQVLEAEVNQAVFNREAFSRYDQA
QLMVESAEINFQLAQQDLMMRVSSAYFDVLLAEQKLTLAKSKMEADKILWERAQASAEVG
LASRTDVLQARSAYDITLSNLISAENDLDIAYESLSRLTGQSLSHVRQLMLDVSIKEPAL
NRALLESQAKTENLLVRLAKQQQRIANEEIEAKKSAQWVNVNLRAAHSYTHCSGDQFGCN
DGNNTSLSLMASVPLYTGGRIHSQVDEARFKNQASLEALRDAQEQARLNIRVQVRNMERG
YALVGALREAVKSGEAFLEAAEEGYRVGLRNMIDVVTARANLFDAQSNLAAALHNLLLTQ
LQLQSTLGRLSVDDLRELDLLLTASK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattaattcaatttgttatttgaacgtaatgcgttcaacttcgctggtttca
gttgcgatcgctgctagcatctcattcgccagcttcgttgcgcaagcaaaagcaccaggc
ctggtagacgtttatcaaatgtccgttctgcatgatgcgaaattggctcaggcgcgtgcc
agctttgatgccgatcgtgaagtgattacccaggcaaggtctttactgttacctacggtg
aacgcttcagccgtttattctcatcctgatttaagagagtcctcctctcgacaagtattg
gaagcggaagttaatcaagccgtttttaatcgtgaggcctttagtcgttatgatcaagca
caactgatggttgaaagcgccgagattaactttcaactggcgcaacaagacttgatgatg
cgagtttcttcagcctattttgatgtattgcttgctgagcaaaaattgactttagccaag
tctaaaatggaagccgataaaattttatgggagcgcgctcaggcttcagcagaagtgggg
ctggccagtcgtactgatgtgctgcaagcacgctctgcttatgatattaccttgtcaaac
ctcattagtgcagaaaacgacttagacattgcttatgagagcctttcaaggttaacgggg
caatctctgagccatgtaaggcaattaatgctggatgtgtcgataaaagaaccggcttta
aacagggctttgttagaaagtcaggctaaaacagaaaatcttttagtacgtcttgcaaaa
caacagcaacgtatcgcgaatgaagaaatcgaggctaaaaaatctgcccaatgggttaat
gttaacttacgtgctgcccatagctacactcattgtagtggtgatcagtttggctgtaat
gatggcaataacacttcattaagcttgatggcttcggtaccgctatacacaggcggacga
attcattctcaagttgacgaagcccgtttcaaaaaccaggcgtctttggaagctttacgt
gacgcacaagagcaggcgcgtttaaacattcgtgttcaggttagaaatatggagcgaggt
tacgcactggtcggtgctttgcgtgaggcggtaaagtcgggtgaggcatttttagaagcg
gcagaagaaggttaccgagtcggcttgcgtaatatgattgatgtagtaacggcgcgcgcc
aatttatttgatgcgcaaagtaatctggcggcagctttgcataatctattgcttacgcaa
ttgcaattgcaaagtaccctcgggcgcttgagtgtcgatgatttgcgcgagttggatcta
ttgctgacggcttcaaaataa
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