Thiomicrospira microaerophila: JX580_06495
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Entry
JX580_06495 CDS
T08259
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh01501
beta-Lactam resistance
tmh01503
Cationic antimicrobial peptide (CAMP) resistance
tmh02020
Two-component system
tmh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JX580_06495
09132 Signal transduction
02020 Two-component system
JX580_06495
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JX580_06495
01503 Cationic antimicrobial peptide (CAMP) resistance
JX580_06495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmh02000
]
JX580_06495
02044 Secretion system [BR:
tmh02044
]
JX580_06495
01504 Antimicrobial resistance genes [BR:
tmh01504
]
JX580_06495
Transporters [BR:
tmh02000
]
Other transporters
Pores ion channels [TC:
1
]
JX580_06495
Secretion system [BR:
tmh02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JX580_06495
RTX toxin transporter
JX580_06495
Multiple protein transporter
JX580_06495
RaxAB-RaxC type I secretion system protein
JX580_06495
Antimicrobial resistance genes [BR:
tmh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JX580_06495
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JX580_06495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UQB41348
LinkDB
All DBs
Position
complement(1332519..1333895)
Genome browser
AA seq
458 aa
AA seq
DB search
MKLKTLVLAMSFTLPGLVVAQTVDFKTSVETTLSQNPQRDITAAQMDQARAAYDQAKLSR
MPQFTLSVTGSHSNNALNVFGMKLQQRQATFGDFGFAEAPGPGSTSTFDTRPRDLNKPGS
HNDLNTRVEMLLPIYNGGKVESFQQQASAMLHAAQQGDQAVKQMLTYFVYEAYEGVHAAR
AFIQVAEQALLAADAYIQTTQNLVRQGVVVRSELLSAQAHRAEIELMHEQAKNQELLAFD
GLRTLMGWSADAPIDVAERVAIELPNLALDEMIRMAMDTNPQLIAMRHQVQASQAEVRLA
KSDKMPSLNLMARSDWNDDTIGFSAHSYTIAAVASWKITDFGMTDRAVDQANASVREQEA
RMRAEEQKVRMGLLQAWREYQNGLKKVTSSQAAVEYASEAQTLITRRYETGVATMTEVLA
GQTQLDKARAELVSSQFSVNMQKAQVLLAIGRMQHNQI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaaacattagtgttggctatgtctttcacgcttccgggtcttgttgtggcg
caaacggtcgattttaaaaccagtgttgaaacgaccctttctcaaaatcctcagcgtgat
attactgccgcacaaatggatcaggcacgtgccgcttatgatcaagccaagttaagccgc
atgcctcaatttaccttgtcggttaccggttcacattctaataatgctttgaatgtgttc
gggatgaaattacaacaacgtcaagcgacctttggtgattttggctttgcggaagcgcct
gggcctggttcaacatctacctttgatacgcgacctcgcgatttaaataaaccaggtagc
cacaatgacttgaatactcgggttgaaatgcttttgcctatttacaacggtggaaaggtt
gaaagttttcagcagcaagcgagtgcgatgcttcatgctgcgcagcaaggagatcaggcc
gttaagcagatgttgacttactttgtatatgaagcttacgaaggtgttcatgctgcacgc
gcctttatccaggttgctgaacaagctttactggcggctgatgcttacattcaaacaaca
caaaatttggtgcgccaaggtgtggtagtgcgttctgaattattgagtgcacaagcacat
cgtgcagaaattgaactgatgcatgaacaggctaaaaatcaggagttgcttgcttttgat
ggtttgcgaacccttatgggatggtctgcggatgcaccgatagatgttgctgagcgtgtt
gccattgagttgccaaatttagccctagacgaaatgattcgaatggctatggataccaat
cctcaattgatcgctatgcgtcaccaggttcaagccagtcaagctgaagttcgattggca
aaatccgataaaatgcctagcttgaatttaatggcgcgctcagattggaatgatgacacg
attggttttagcgcgcactcttatacgattgctgcagtcgcctcttggaaaataacggat
ttcggcatgaccgatcgcgctgtcgatcaagcgaatgccagtgtacgcgaacaagaagct
agaatgcgagctgaagaacagaaagttcgaatgggcttgttacaggcttggcgggagtac
caaaatgggttgaaaaaagtgacctcaagtcaggctgcggttgaatatgcttcagaggct
cagactttaatcacgcggcgttacgaaacaggtgtggcgaccatgactgaggttttggca
ggtcaaacgcaacttgataaagcacgtgcggaattagtaagttctcagtttagcgttaat
atgcaaaaagcacaggtgttgttagctatcggccgtatgcagcataatcagatataa
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