Thiomicrospira microaerophila: JX580_11315
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Entry
JX580_11315 CDS
T08259
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh01501
beta-Lactam resistance
tmh01503
Cationic antimicrobial peptide (CAMP) resistance
tmh02020
Two-component system
tmh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JX580_11315
09132 Signal transduction
02020 Two-component system
JX580_11315
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JX580_11315
01503 Cationic antimicrobial peptide (CAMP) resistance
JX580_11315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmh02000
]
JX580_11315
02044 Secretion system [BR:
tmh02044
]
JX580_11315
01504 Antimicrobial resistance genes [BR:
tmh01504
]
JX580_11315
Transporters [BR:
tmh02000
]
Other transporters
Pores ion channels [TC:
1
]
JX580_11315
Secretion system [BR:
tmh02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JX580_11315
RTX toxin transporter
JX580_11315
Multiple protein transporter
JX580_11315
RaxAB-RaxC type I secretion system protein
JX580_11315
Antimicrobial resistance genes [BR:
tmh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JX580_11315
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JX580_11315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Citrate_synth_N
MHC_II_alpha
Motif
Other DBs
NCBI-ProteinID:
UQB42226
LinkDB
All DBs
Position
complement(2321660..2323081)
Genome browser
AA seq
473 aa
AA seq
DB search
MKHKPIALSLGLGLLASLSITAQANPFVLEDYYDPFKTKKALSAEHVPGYFNDIECGVPL
SLPSLTLAAAVNAALCRDPRIQQAWSKAQAVRAQGGVVQSEYLPNVNARVGLDRTEQSID
GVPSEFTDQNSQSFRLSLDWLVFDFGRKQRQQALNNAQLQQAKVELEDVSQAVIFETTIQ
FFELLQAQAVMAARVEAERLAQSSVDIVEQRLAGGAVNAADLIQVQSNLARAKLELRQQA
SDVQRKQASLNQSIGGFLGQTLTLVEPMSKRGSAGQRYPDLVRSAQMSHPKLLSALARLD
HAREQLGLAQTAYYPSLVATAEYMHEFDDDKHFRGRRADNSTQYGIQLQMPIFTGFRNHY
QTQRATSELALVQAEVAQVRDEVSVKLWQAFQAWQDSEDLVALSDQLFQRAEQSELINRQ
RYIEGVGTIFDWINAQENLEQARMARAQSYNQLNTSRIDLARASGMLSIWTLE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataaacctatcgcgttgagtttaggtcttgggctgttagcgagtttgagtata
acagctcaagcaaatccatttgttttagaggattattacgatccttttaaaacaaaaaag
gcattatcggctgagcatgtgccaggctattttaatgacatagaatgtggcgtgccctta
tctttgcctagcttaacgctggcggcagccgttaatgcggcgctgtgtcgtgatccaaga
attcagcaggcctggtcaaaagctcaagcggtacgtgcgcaaggcggtgtggtgcaatcg
gaatatttgccgaatgtgaacgctcgcgttggcttggatcgcacagaacaatcgattgat
ggggttccgagtgagtttaccgatcaaaattcgcagagttttcgcttgtcactggactgg
ttagtttttgattttgggcgcaaacagcgccagcaggcattaaataatgcccagcttcag
caagcaaaggtcgaacttgaagatgttagccaagcggtaatttttgaaaccacaattcag
ttctttgaactgttacaagctcaagcggtgatggcggccagagttgaggcagaacgcttg
gctcagtccagtgttgacattgttgagcagcgtcttgcaggtggtgcggtaaatgctgca
gatcttattcaagttcagtctaatcttgcaagagctaagcttgagctcagacaacaagcc
agtgatgttcaacgtaaacaagcgagtttaaatcagtctataggtggctttctaggacaa
accttgacactggttgaacccatgtcaaagcgtggatcagcagggcagcgttatccagat
ctagtgcgatcagctcaaatgagtcaccctaaactgctatccgcattggcgcgcttagat
catgcacgagagcaattgggattagcacaaacggcctattaccccagcctcgtcgccacg
gctgaatatatgcatgagtttgatgatgacaagcactttagaggacggcgtgcagacaat
agcacgcagtatggcattcagctgcaaatgccgatttttacaggtttccgtaatcactat
caaacccagcgagcgacctcagaattagccttggttcaggcagaagtggctcaagttcgt
gatgaagtcagtgtaaagttatggcaagcttttcaagcttggcaagattcagaagacctg
gtagcgttaagtgatcaacttttccaacgtgcggagcaatcggagttgattaatcgacaa
cgttatattgaaggggtcgggacgatttttgattggataaacgcccaggaaaatcttgag
caggcacgtatggcacgagctcaaagctacaatcaactgaatactagccgtattgattta
gccagagccagtggtatgctcagtatttggacacttgaatag
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