Thermodesulfobacterium geofontis: TOPB45_0228
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Entry
TOPB45_0228 CDS
T01547
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
top
Thermodesulfobacterium geofontis
Pathway
top01501
beta-Lactam resistance
top02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
top00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TOPB45_0228
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TOPB45_0228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
top02000
]
TOPB45_0228
01504 Antimicrobial resistance genes [BR:
top01504
]
TOPB45_0228
Transporters [BR:
top02000
]
Other transporters
Pores ion channels [TC:
1
]
TOPB45_0228
Antimicrobial resistance genes [BR:
top01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TOPB45_0228
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
TOPB45_0228
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
TOPB45_0228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Takusan
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
AEH22343
UniProt:
F8C2W4
LinkDB
All DBs
Position
218087..219484
Genome browser
AA seq
465 aa
AA seq
DB search
MRKLLILFASSFILFGCSQGVKLDAPELDLPKEIASKSLKGEAEKKKELLPDKFWEAYND
PILNELVEKALRQNEDILIAEARIEQTLAMVRYVGADRFPYLGYGASVTRQRTSEETIGP
KPGSTYTTYQLNLNVQYELDLFGRISSQEKASLYRYLSTLHGRDAVKLSVISLVMNAYFD
LLAKERMVEVAERQLQTLKEIYNLREKEFELGLANIQVVLQARSEVEAIEQTLKSLKQER
ELLRNLLALLVGESPAKMFERSAKTSLDYPQALRLPPLLLSEVLERRPDIQSALEELKAS
AYDVASAKAEYFPRITLTSALGYQSIELANLFKGGATFWNIAGLITGPILDFGKRESKVK
LAQAKQREALLNYVKTVRTAFKEVQDSLIQLEMLEGRIKDLEQRVKTLEELYKVSELRYK
EGLSRYLEVLDSERALLSAKLDLERLKADYYKSQVYFIKAIGGGF
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagttgcttatactatttgcaagctcttttatcctttttggatgcagtcaaggg
gtaaagcttgatgcaccagagcttgacctgccaaaggagattgcttctaaaagtctaaag
ggggaggcagaaaaaaagaaggagctattgccggacaagttctgggaggcttacaatgac
cctatcttaaacgagcttgtggaaaaagctctacggcagaatgaagatatccttatcgct
gaggcaaggatagagcaaactttagccatggtccgctatgtgggagcagataggttcccc
tatcttggttatggggcaagtgtaacccggcagagaacctctgaggaaactataggtcca
aaacctggctctacctacaccacctatcagctcaacctaaatgttcagtatgagcttgac
ctttttggcagaatcagctctcaggaaaaggcaagcctttatcgttatctttctaccctt
catggtcgggacgccgttaagctttcggtgataagccttgtcatgaacgcatactttgac
cttttggcaaaggaaaggatggtggaagtagctgagagacagcttcaaactctgaaagaa
atatacaaccttagggaaaaggaatttgagcttggtttggcaaacattcaagttgttctt
caggcaaggtctgaggtagaagccatagaacaaacgctaaaatccttaaagcaggaaagg
gagcttctaagaaacctcttagctctccttgttggtgagagcccagctaagatgtttgaa
aggagcgccaaaacttcccttgattaccctcaggctttaaggctccctcctcttttgctt
tctgaggtcttagaaagaagaccggacattcaatcggctttagaagaactaaaggcttct
gcctatgatgtagcttcagccaaagccgaatacttcccaaggatcacccttacttcagcc
cttggttatcagagcatagagcttgctaatcttttcaaaggaggtgcaaccttctggaat
atagcgggtttaattaccggtcccatccttgattttgggaagagagaaagcaaggttaag
cttgctcaagcaaagcagagggaagctctcttaaactatgttaaaactgttagaactgcc
tttaaagaggtgcaggattctctaattcagcttgagatgcttgaaggaaggataaaggac
ttagaacaaagggtaaagacgcttgaggagctatacaaagtttctgagcttcgttacaaa
gagggcttatcgagatatttagaagttttagacagtgaaagggctttgctttccgcaaag
cttgatttagaaagactaaaggcagactactacaaatcccaggtctactttataaaagct
atagggggcggtttttaa
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