Thalassiosira pseudonana: THAPSDRAFT_26365
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Entry
THAPSDRAFT_26365 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K07515
enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.211
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00062
Fatty acid elongation
tps00071
Fatty acid degradation
tps00280
Valine, leucine and isoleucine degradation
tps00310
Lysine degradation
tps00380
Tryptophan metabolism
tps00410
beta-Alanine metabolism
tps00640
Propanoate metabolism
tps00650
Butanoate metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01212
Fatty acid metabolism
Module
tps_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
THAPSDRAFT_26365
00650 Butanoate metabolism
THAPSDRAFT_26365
09103 Lipid metabolism
00062 Fatty acid elongation
THAPSDRAFT_26365
00071 Fatty acid degradation
THAPSDRAFT_26365
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
THAPSDRAFT_26365
00310 Lysine degradation
THAPSDRAFT_26365
00380 Tryptophan metabolism
THAPSDRAFT_26365
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
THAPSDRAFT_26365
Enzymes [BR:
tps01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
THAPSDRAFT_26365
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
THAPSDRAFT_26365
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Pyr_redox_2
NAD_binding_2
DAO
AlaDh_PNT_C
NAD_Gly3P_dh_N
LEM
Pyr_redox
NAD_binding_8
Motif
Other DBs
NCBI-GeneID:
7446859
NCBI-ProteinID:
XP_002292674
JGI:
26365
UniProt:
B8C9J4
LinkDB
All DBs
Position
10:634838..636974
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AA seq
683 aa
AA seq
DB search
MWESDVHGNDSVKSIVFTSAKETGFIAGADIFDISQVEDKAQLVPVIEEALNFFLKMKSK
GVPMVAAIHGPALGGGLEWALWCDYRICTDSSSTKLGLPEVKLGLLPGFGGTQNLPKLVG
IQGGMDMMLTGKDIRPPKAKKMGLVDLVVAPQSLESVAIQSAEGLANGTVKKSKPKEKSL
MNRLIEDTPPGQYLMWDKVKKMVDKNTGGNYPAPYAIIDCVKYGLAHPSGNDKFKHEREE
FAKLAATKESEALIGIFDGMNQMKKLSSSAAPIDVKKVAVMGAGLMGAGIAQVTAEKGYD
VLLKDRDAASLGRGLSYMTENWEKKHKRKRMTTYQLNLNTSRVTPLADDTESWKRHFAGA
DLVIEAVFENLDLKRKIVQQVEEVTSDHCVFATNTSAIPIADIAAPGPDIKRPENIVGMH
YFSPVPSMPLLEIIPHAGTSDEALATAFAVGTKQGKTCVVVKDVPGFYVNRCLGPILVEV
SALVKEGVPLETLDKAMKKFGMPVGPITLIDEVGVDVAAKVSTFLSDADLGVRMGGGDLS
LMTNMVEKGWLGRKSNQGFYTYAGKKGKTIGSEVTAYLKEFTGGKVSNLSEKDIQDRIAS
RLVNEAAKCLEDDIIENPVAGDIGLVFGIGFAPFKGGPFRYLDAVGVSSYVDRMNGFADT
LGEQFEPCQLLKDYATSGKKFHG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaatctgacgttcacggcaacgacagcgtgaaatccatcgtattcacttctgca
aaagagactggattcattgcaggtgctgacatctttgacatatctcaggtggaggataag
gcacagttggtccccgtgatcgaagaggcgttgaacttctttctcaagatgaagtctaaa
ggagttcccatggtggctgcaattcacggtccagccttgggaggagggttggagtgggct
ttgtggtgcgattatcgaatatgtacggattcttcatctactaaacttggattaccagag
gtgaagttgggattgctgcctggtttcggtggaacacagaatcttcccaagttggttggt
attcaaggaggaatggatatgatgctaactgggaaggacattcgtcctcctaaagcgaag
aagatgggacttgtggatttggtggtggctcctcaatctttggagagtgtggctattcag
tctgccgagggactagccaatggtacagtcaagaagagcaaaccgaaagagaagtctttg
atgaatcgtcttatcgaggatacgcctcccggtcaatatttgatgtgggataaggtgaag
aagatggtggataagaataccggagggaactatcctgctccatatgccattattgattgt
gtcaagtatggattagctcatccttcgggcaatgacaagttcaaacacgaacgtgaggag
tttgccaagcttgcagcaacgaaagagagcgaggcactcattggtatctttgacggtatg
aaccagatgaagaaactgtcgtccagtgctgctccaatcgacgtgaagaaggtggcagtc
atgggggctggattgatgggagcaggaattgctcaagtgactgccgaaaagggatacgat
gtcttgctcaaagatcgagatgccgcgagtcttggacgaggattatcgtacatgaccgaa
aattgggaaaagaaacacaagcgaaagagaatgacaacgtatcagttgaacttgaacaca
tctcgagttactcctcttgcggatgatacagagagttggaaacgtcattttgcaggtgcc
gacttggtgattgaggcagtgtttgagaacttggatttgaagagaaagattgtacagcag
gtggaggaagtgacttctgatcactgcgtctttgccaccaatactagtgctattccaatt
gcagacattgcggctcctgggcctgatatcaaacgccccgagaacattgttggtatgcat
tacttctctcccgtaccttccatgccattgctggagatcatccctcatgctggtacatcg
gacgaagctttggctactgcatttgctgtcggaacaaagcagggcaagacgtgtgtggtg
gtgaaggacgttcctggattttacgtcaatagatgtctcggtcctatccttgttgaagta
tctgcattggtgaaggagggagtaccacttgaaacactagacaaggcgatgaagaagttc
ggtatgcctgttgggccaatcactttgattgatgaggttggtgttgatgttgcggccaag
gtatcaaccttcctctcggatgccgatctcggagtaaggatgggtggaggcgacctatcg
ttgatgaccaacatggtagagaagggatggctcggaaggaagtctaaccagggcttctac
acctacgctggcaagaagggaaagacgattggatctgaagtgaccgcctacttgaaagag
ttcactggtgggaaggtgtctaacctcagcgagaaggatatccaagatcgcatcgccagt
cgcttggtaaatgaagctgccaagtgtttggaggatgacatcattgagaatcccgtagct
ggagacataggcctcgtattcggaattggattcgctcctttcaagggaggaccgttccga
tatcttgatgcagttggtgtctcttcgtacgtcgacagaatgaacggctttgcggatact
ctcggtgagcagtttgaaccgtgccagttgttgaaggattatgctacatctggaaagaag
tttcatggatga
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