Thalassotalea psychrophila: RGQ13_06030
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Entry
RGQ13_06030 CDS
T10151
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy01501
beta-Lactam resistance
tpsy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGQ13_06030
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGQ13_06030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpsy02000
]
RGQ13_06030
01504 Antimicrobial resistance genes [BR:
tpsy01504
]
RGQ13_06030
Transporters [BR:
tpsy02000
]
Other transporters
Pores ion channels [TC:
1
]
RGQ13_06030
Antimicrobial resistance genes [BR:
tpsy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RGQ13_06030
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RGQ13_06030
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RGQ13_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
MIP-T3_C
Motif
Other DBs
NCBI-ProteinID:
WNC73547
LinkDB
All DBs
Position
complement(1420079..1421593)
Genome browser
AA seq
504 aa
AA seq
DB search
MSNPLLKPNYLVLAITLLSGCAIGPDYQKAPEVAAEELPTWQFNDETNQTGASVATLDWR
SFYQDPALQEYIQQALDNNIDLKIASERVYRSQIGLVESDSRFLPNFDMTFDADRERTSK
ALTTDPKIDNEFKWTANVSWELDLWGKLRRSNEADIANLQATQAEFYGSRISLIAQVAEL
YYKIQDAQNQIQLTNNNIVAREKSKRITELRHKQGIISGLDVSQSNVELMQEKLKLPALH
NSLSSSMYQLSILLDQSPKKLKIPDRNPNNLDRESLPMGLPSELLKRRPDVISQERKLHA
ATAAIGVAKADYFPNISLVGNFGAKSLEVDDLLDNAEYWEIGADISMPLFNWGATTANVD
KVKSEYRETILNYRKVIFVAFRESAEAIENVDKNRTEYYLKRELLAATDEYLRLANLRYS
NGVISYIDVLDAQRNQAKSQQDFSAAAESLQTSFVGLYKTLGGGWDAAGYNQALNSEEDI
DLTVERQSNEINSQMPVIEQKQEN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacccattgttaaagccaaactacttagtgctggcaattactttattatctggg
tgtgctattggccctgattatcaaaaagctcctgaagtagcagcggaagaattgcctaca
tggcaattcaacgatgaaacaaatcaaacaggtgcttcagtagccacattagactggcga
tcattttatcaagacccggcactccaagagtacattcaacaagctctggataataacatt
gacttaaaaattgccagcgagcgggtgtatcgctcgcaaattggtttagtagaaagtgac
agccgttttttaccaaattttgatatgacctttgacgccgatcgtgagagaaccagcaaa
gcgttaacaacagatccgaaaatagacaatgaatttaaatggacggctaatgtatcttgg
gagcttgatttatggggtaaattgcgccgcagcaatgaagccgacattgccaatttacag
gctacccaagcagagttttacggttcaagaatatcgctaattgcgcaagttgccgagctg
tattataaaattcaagatgctcaaaatcagatacaattaactaataataatattgtcgct
cgtgaaaagtctaaacgaattactgaattaagacacaagcaaggtattatctcaggacta
gatgtgagtcaaagtaatgtggagttaatgcaagaaaaattgaaattgccagcactacat
aactcgctcagttcaagcatgtatcaattgtctatattactggatcaatcacctaaaaaa
ctaaaaattccagatcgaaatccaaacaacttagatcgagagtcgctacctatggggtta
ccatcagagttattaaaacgtcgacctgatgttatctcgcaagaacgtaagcttcatgcg
gcaaccgccgcaattggcgtagcaaaggctgactattttcccaatataagcttagtgggt
aactttggtgcaaaaagtttagaagtagatgacctactcgataatgccgagtattgggaa
ataggtgccgatatttctatgcccttatttaattggggggcaacaacggctaatgttgac
aaagtaaaatctgaatatcgtgaaaccattcttaattatcgtaaagttatttttgtagct
tttagagagtcggctgaagccattgaaaatgttgataaaaaccgtactgaatattattta
aaacgcgaattactcgctgcaacagatgaatatttacgcctcgccaatttacgttatagc
aatggtgttatcagctatatcgacgtactagatgctcagcgtaaccaagccaaatcacaa
caagatttttcggctgcggccgaaagcttacaaacatcatttgtcgggctttataaaacg
ttgggtggtggctgggatgcagccggttacaatcaagcattaaatagtgaagaagatatc
gatctgacagtagagcgacaaagcaatgagatcaacagccaaatgccagtgattgagcaa
aagcaagaaaattaa
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