Tenacibaculum retecalamus: PG912_08255
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Entry
PG912_08255 CDS
T08858
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
trt
Tenacibaculum retecalamus
Pathway
trt01501
beta-Lactam resistance
trt01503
Cationic antimicrobial peptide (CAMP) resistance
trt02020
Two-component system
trt03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
trt00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PG912_08255
09132 Signal transduction
02020 Two-component system
PG912_08255
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PG912_08255
01503 Cationic antimicrobial peptide (CAMP) resistance
PG912_08255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trt02000
]
PG912_08255
02044 Secretion system [BR:
trt02044
]
PG912_08255
01504 Antimicrobial resistance genes [BR:
trt01504
]
PG912_08255
Transporters [BR:
trt02000
]
Other transporters
Pores ion channels [TC:
1
]
PG912_08255
Secretion system [BR:
trt02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PG912_08255
RTX toxin transporter
PG912_08255
Multiple protein transporter
PG912_08255
RaxAB-RaxC type I secretion system protein
PG912_08255
Antimicrobial resistance genes [BR:
trt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PG912_08255
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PG912_08255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WBX70275
LinkDB
All DBs
Position
complement(1750652..1751974)
Genome browser
AA seq
440 aa
AA seq
DB search
MKTTYLIIGFLFVNVSFYGQEILSKEKAVEITLENNYDIRVTKNNLETAKNNKSIYNSGY
LPTVVGNAGATYSNNDSDNEFKNGTINSVTGAESKGYNASVGLNYTIFNGFNRQNTFKRL
KESYNLTELQARQVIENTLTTLFLAYYEVGRLTENETAQKETLAISKRRLQRAIYSFDYG
QNTKLDVLNAEVDVNNDSITYINVKRQLANSKRDLNVVLGRSVNTPVIVNTNVTYTVDLN
LTDVLAKSKTNNANLLQAKKNIELRQLDIKINKAGWMPNVGLTSSYAWSKSNNDAVNDFS
PISNTRKGLNAGVNLSWNIFDSGRTKTNVTNAKIALETQEIQKLQQEERLERDVNNAWET
YQNALFSLQVQEKNVITNKLNFDRTNERYKLGQVTSIDFRQAQVNLINAELSVSNAKYTA
KNAELQLLQLAGSLLDNKNF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacctatttaattattggattcctgtttgtaaatgtttctttttatggacaa
gagatattatcaaaagaaaaagcggtagaaattaccttagaaaataattacgacatacga
gttactaaaaacaacttagaaacagctaaaaataataagagtatctataatagtggttat
ttgccaacggtagtaggaaacgccggtgccacctatagtaacaacgattctgataatgaa
tttaaaaacggaacgataaactcggttaccggagcagaatctaaaggatacaatgcatct
gtaggattaaattatactatttttaatggatttaacaggcaaaacacgtttaaacgctta
aaggaatcgtataatttaacagaattacaagcacgacaagtaattgaaaacaccttaacc
acattatttttggcgtattatgaagtaggtagattgacagaaaatgaaacagcgcaaaaa
gaaacgttagcaatttctaaaagacgtttacaaagagctatttatagttttgattacggt
caaaacacaaaattagatgttttaaatgctgaagttgatgttaataatgatagcattact
tacataaatgtaaaaagacaattagcaaactcaaaaagagatttaaatgtggttttaggt
agaagtgtaaatacgccagtaattgtaaatacaaatgttacttatacggttgatttaaat
ttaacagatgtattagcaaaatcaaaaacaaataatgcgaatttattgcaagcaaaaaag
aacattgagttacgacaattagatattaagattaataaagcgggctggatgccaaatgta
ggtttaacaagttcgtatgcttggagtaaaagtaacaacgatgcagtaaatgattttagt
ccgatttctaatacaagaaaaggattaaatgcaggtgtaaatttgtcttggaatattttt
gatagtggacgtaccaaaaccaatgttaccaatgctaaaatagcgttagaaacacaagaa
attcagaaattacaacaagaagagcgtttagaaagagatgtaaacaatgcatgggaaacc
tatcaaaatgccttattttcgttacaagttcaagaaaaaaatgtaataactaataagctt
aattttgatagaactaatgaacgttataaattaggacaagttacttcgattgattttcgt
caggcacaagtaaatttaataaatgctgaattaagtgtaagtaatgcaaaatatactgca
aaaaatgccgaattacaattgttgcaattagcaggaagtttattagacaataagaacttt
tag
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