Thiothrix subterranea: HMY34_10975
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Entry
HMY34_10975 CDS
T07831
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
tsb
Thiothrix subterranea
Pathway
tsb01501
beta-Lactam resistance
tsb01503
Cationic antimicrobial peptide (CAMP) resistance
tsb02020
Two-component system
tsb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HMY34_10975
09132 Signal transduction
02020 Two-component system
HMY34_10975
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HMY34_10975
01503 Cationic antimicrobial peptide (CAMP) resistance
HMY34_10975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsb02000
]
HMY34_10975
02044 Secretion system [BR:
tsb02044
]
HMY34_10975
01504 Antimicrobial resistance genes [BR:
tsb01504
]
HMY34_10975
Transporters [BR:
tsb02000
]
Other transporters
Pores ion channels [TC:
1
]
HMY34_10975
Secretion system [BR:
tsb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HMY34_10975
RTX toxin transporter
HMY34_10975
Multiple protein transporter
HMY34_10975
RaxAB-RaxC type I secretion system protein
HMY34_10975
Antimicrobial resistance genes [BR:
tsb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HMY34_10975
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HMY34_10975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QQZ29249
LinkDB
All DBs
Position
complement(2242608..2244191)
Genome browser
AA seq
527 aa
AA seq
DB search
MKQHTLAFLIAASLTLITQQAQAENLLQVYQQAKGYDAQFKALESDYLAILERKPQALAA
LKPQVGVSGAITQSRQRTTRDASLLDSDDVGGSTASSYSVNVSKSLYNKALNAQVDQADS
VIAQASAGLEAEREGLILRVAEAYFNFLLAQDNLEFARTEKDAISRQLEQTRAYFDAGRS
AITDVKEAESRYDLAVAQEINAVNQLDLGREQLRVLTGGFYQTLNAPAANLPLTVPTPAD
IEQWVKTAKANNKQLIASQHAIQAAQTAIDIQRAAKKPVVDLVARQTGNDTQSSAEIDPQ
NYGASVGVQVSMPLYTGGSTDSKIREAQHNFRQAQQQFEFQNRTTEQQARNAFLTVQSSI
SQVKANQRALASAETAAEATQAGFEVGTRTAVDVLTSLRNVFSARRDYSQTRYTYLLNTL
KLRQAAGILTDADIANMNTFMTSTPKQLAAALQPSAPAADIEDNGSFESYSAAPTAADTA
KAEAETPPVAQAAMPVEQIAPAKPAPVQQAPAAAPPYFIIPQDVGKK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacacacactggcattcttgatagcagcctccctgacactcatcacgcagcaa
gcacaggcagaaaacctgcttcaggtttaccaacaagccaaaggctacgatgcccaattc
aaggcgctggaaagcgattatctggcgattctggagcgcaaaccgcaagcacttgctgcg
ctcaagccacaagtgggtgtttcgggagccattacccaaagccgccagcgcaccacacgc
gatgcatcgttattggactcagatgacgtaggcggtagcactgccagtagttacagcgtg
aacgtcagcaagtcactgtataacaaagctctgaacgcccaggttgaccaagccgattca
gtcattgcacaagccagtgccggtttggaagctgaacgcgaagggctaatcctgcgcgtc
gcagaagcctacttcaacttcctgttagcgcaagataatctcgaattcgcccgcactgaa
aaagacgccatcagccgccaactggaacaaacccgcgcctattttgatgctggtcgttcc
gcgattaccgacgtgaaagaagctgagtcgcgctacgatctcgcggttgctcaggaaatc
aacgccgtcaaccagcttgacctcggtcgtgaacaattacgggtgctaacgggtggtttc
taccaaacgctgaatgcgccagcagccaatctcccgctgacggtgccgaccccagccgat
attgaacaatgggtcaaaaccgccaaagccaacaacaaacaactcattgccagccagcac
gcgattcaggcagcgcaaacagcgattgatattcagcgtgcggcgaaaaagccagtcgtg
gatctggttgccagacaaaccggcaacgacacccaaagcagcgctgaaatagacccgcaa
aactacggcgccagcgtgggcgtgcaagtaagtatgccgctgtataccggcggcagcacg
gattcaaaaatccgcgaagcgcaacacaacttccgtcaggcgcaacagcaatttgagttc
caaaaccgcaccaccgaacaacaagctcggaatgcatttttgaccgtgcaatccagtatc
agccaagtaaaagccaaccaacgtgccttagcttctgctgaaacagcggctgaagccacc
caagcaggctttgaagtcggcacccgcacagcggtggacgtgctgacctcactgcgcaat
gtgttcagcgctcgccgcgattattcacaaacgcgctacacctatttgctgaatacactg
aaactgcgccaagccgccgggattctgaccgacgccgacattgccaatatgaacactttc
atgacctcaacgcctaagcaattagcggcggcattgcaacccagcgcccccgctgcggat
attgaagacaatggcagttttgaaagctacagcgctgcaccaacagcagcggacaccgcc
aaagccgaagcggaaacgccaccggtagcgcaagcagcaatgcctgtggaacaaattgca
cctgccaaaccagcgcccgtacaacaagcccctgctgcggcgccgccatatttcatcatc
ccgcaagatgttggcaaaaaataa
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