Thiosulfatimonas sediminis: THMIRHAS_20320
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Entry
THMIRHAS_20320 CDS
T06859
Name
(GenBank) RND transporter
KO
K12340
outer membrane protein
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse01501
beta-Lactam resistance
tse01503
Cationic antimicrobial peptide (CAMP) resistance
tse02020
Two-component system
tse03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
THMIRHAS_20320
09132 Signal transduction
02020 Two-component system
THMIRHAS_20320
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
THMIRHAS_20320
01503 Cationic antimicrobial peptide (CAMP) resistance
THMIRHAS_20320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tse02000
]
THMIRHAS_20320
02044 Secretion system [BR:
tse02044
]
THMIRHAS_20320
01504 Antimicrobial resistance genes [BR:
tse01504
]
THMIRHAS_20320
Transporters [BR:
tse02000
]
Other transporters
Pores ion channels [TC:
1
]
THMIRHAS_20320
Secretion system [BR:
tse02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
THMIRHAS_20320
RTX toxin transporter
THMIRHAS_20320
Multiple protein transporter
THMIRHAS_20320
RaxAB-RaxC type I secretion system protein
THMIRHAS_20320
Antimicrobial resistance genes [BR:
tse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
THMIRHAS_20320
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
THMIRHAS_20320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BBP46659
UniProt:
A0A6F8PX12
LinkDB
All DBs
Position
complement(2206591..2207991)
Genome browser
AA seq
466 aa
AA seq
DB search
MFNAKPLFHVGGLAFALALAIPLAAQAQTYTFAEAVRIAISANPEMDVAKARLMQAQSAL
GKANASEMPQINFSVTGSYSNNALNVFGMKLQQRQATVGDFGIAEPGAQSATGLNTGYEP
GALNNPGPHSDVNTRIEVLYPVYNGGKVASYQKQAREMIDAAGNGEVAVEQYLTFGVYQA
FEAVHAARSFITVAEQAKKTAQEFVRTTENLVRQGVVVRSELLSAKVNASAADVALAQAK
GQEQIALDGLRILMGLQSTDAVDVAERLDIRLPDGDLASILAHAIDKNPQLAAQRKQATS
SLYAVDAARADEKPSFNVMARQDWNDESIGLESSSYTLAGVFSWKVSDFGLTENTIKMAQ
AEAQQKQAETASMENKVKFEIMQAWHRLQVAREQVTSSKLTVEQAVEAQFLVTKRYENGV
ATFTELMASQTQLDKARADLVAAEFEVNVQKAKLRLAAGSMDVKQL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgcaaaaccgctctttcatgtcggtggtctggcttttgccctggccctggca
attcctttggccgcacaggcgcaaacgtatacgtttgctgaagcggtccgcatcgcaatc
agtgccaacccggaaatggatgtcgctaaagcgcgtttaatgcaggctcaatctgcattg
ggtaaagcaaatgccagtgaaatgccacaaattaacttttcggtgaccggttcttactcg
aataacgccttaaatgtgttcggcatgaaactgcaacagcgtcaggcaacggtgggtgat
tttggtatcgctgaaccaggtgctcagtcagcaacaggcttaaataccggctacgagcca
ggtgctttaaataaccccggcccacattcggatgttaatacgcgtattgaagtgctgtat
ccggtgtacaacggcggtaaggtagctagctatcaaaaacaagcgcgtgaaatgattgat
gccgccggcaacggggaagtggctgttgagcaatatctgactttcggtgtgtaccaagca
tttgaagcggtgcacgctgcgcgctcttttatcacggttgctgaacaagccaagaaaacc
gcgcaagaatttgtacgcaccacagaaaacttggtgcgccaaggggtggtggtgcgctct
gagttgctgagtgctaaggttaatgcttctgctgcggatgtcgctttagcgcaagcaaaa
ggtcaagagcagattgcgcttgatggtttacgtattttgatgggtttgcaatcgactgac
gcagttgatgttgctgaacgtttggatattcgtttaccggatggtgacttggcgtctatt
ttggcgcacgctattgataaaaatccacagcttgccgcacaacgtaagcaagcgacgtct
tcactgtatgcggtagacgcggcacgtgctgatgaaaagccaagctttaatgttatggct
cgtcaagattggaatgatgagagcatcggtttagagagttctagttataccttggcaggg
gtgttttcttggaaagtcagtgatttcggtttgactgaaaataccatcaaaatggcacaa
gccgaagcgcagcaaaagcaagctgaaaccgcttcgatggaaaacaaggtgaagtttgag
attatgcaagcttggcatcgtttacaggtggcgcgcgagcaggtcacgtccagtaaatta
acggttgaacaggcggttgaagcgcagtttttggttaccaagcgttatgaaaatggggtg
gcgacctttaccgagttaatggcttcgcaaacgcagttggataaggcgcgtgctgatttg
gtcgcggcggagtttgaagtgaatgtccagaaagcaaaacttcgtttggctgcgggcagt
atggatgttaaacagctttaa
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