Thamnophis sirtalis (common garter snake): 106553558
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Entry
106553558 CDS
T06107
Symbol
C1R
Name
(RefSeq) complement C1r subcomponent
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106553558 (C1R)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106553558 (C1R)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106553558 (C1R)
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
106553558 (C1R)
Peptidases and inhibitors [BR:
tsr01002
]
Serine peptidases
Family S1: chymotrypsin family
106553558 (C1R)
Membrane trafficking [BR:
tsr04131
]
Endocytosis
Phagocytosis
Opsonins
106553558 (C1R)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUB
Trypsin
Sushi
FXa_inhibition
EGF_CA
CDCP1_CUB_6
cEGF
CUB_2
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
106553558
NCBI-ProteinID:
XP_013927599
UniProt:
A0A6I9YUD5
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSPIVFLLQGAFLVAAVSSRPTAKLYGEITSPNYPKTYPNNNISTWDILVPKGYRVKLSF
RLFDLEPSETCRYDFVKITANKKDLGRFCGQVDSATGNYPRDREFLSTNNRMRLLFQSDF
SNEENGIVVSYKGFLAYYQAVDLDECAPRNDVEDGPQCQHFCHNYIGGYFCSCQPGYQLQ
SDGYSCKVDCSNELFTETFGYLTSPGYPEPYPANLQCNYSIRVEKGMTIILKFLQPFEID
DHQQVHCPYDQLKIHAGMKQIGEFCGRTPPGVIETNSSSVDVIFLTDESGYSRGWKISYS
IERIRCPQPVAHDAFTIIKDPQPMYQYQDYFIVSCKTGYNLMEGQEHLTSFTSVCQHDGT
WHRAMPRCEIVNCGEPKFLKNGEFNFISATKNNNYESVIKYRCNEPYYRLLNTPGKGIYT
CSSGGSWKDEVNHVDIPMCLPVCGKPDHPVVEVQRIIGGKDAPRGSFPWQAMTVITGRAG
GALLGDRWILTAAHVVYPKGKGNDTEMLTPVQVAEKAEIFLGHTDVTELYKEGNKPVLRL
FVHPDYNPNDEHNFDGDIALIELRDPVTLGPDTLPICLPESDNTTYYHTGWMGYASGFGV
EKNILASRLKYAPIPVGNQDLCRKWLRGKKISQKDPVFSDNMFCAGTPHGGKDTCQGDSG
GALAVRDPETQRWVATGIVSWGLECGKGYGFYTKIINYLDWIKGIVGNDWVSMQVSH
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccattgtcttcctgcttcagggagctttcttagttgctgcagtcagttccagg
ccaacagcaaagctttatggggagatcacttccccaaattatcccaaaacataccccaac
aacaacatcagtacttgggacattttagtgccaaagggttacagagtgaagctgagtttc
cggctgtttgatctggagccatctgagacctgtcggtatgactttgtcaagatcacagca
aacaagaaggacttaggccggttctgtggccaggtagactctgccacaggcaactaccca
agagacagggagtttttgtctaccaacaatcgcatgcggctcctgttccagtctgacttc
tctaatgaggagaacggcattgtggtttcctataagggattcttagcttattatcaagct
gtggatctagatgagtgtgcccccagaaatgacgttgaagatggtccccagtgccagcat
ttctgtcacaactatatagggggctacttctgctcttgccagcctggctaccaactccag
agtgatgggtattcttgcaaagtggattgcagcaatgaattgttcacggaaaccttcggt
tacttgacaagccctggataccctgagccctatccagctaacttgcagtgtaattacagc
atacgggtagagaaagggatgaccattatcctcaagttcttgcaaccctttgaaattgat
gaccaccaacaagtccactgcccttatgaccagcttaagatccatgctggcatgaaacag
attggtgaattctgtggcagaacgcctccaggggtgattgaaaccaatagttcttcagtg
gatgtcatttttctcacagatgaatcaggatacagccgagggtggaagatttcgtacagt
atagaaagaatccgttgcccacagcctgtggcacatgatgccttcaccatcatcaaggac
ccacagcccatgtatcaataccaagactacttcattgtcagctgcaaaactggatataac
ctgatggagggtcaagaacatttgacatcctttacctctgtctgccaacatgatgggacc
tggcatcgtgctatgccccgatgtgaaattgtgaattgcggtgaacctaaattcctgaaa
aacggggaatttaattttatatcggcaacaaaaaataacaactatgagtcagttatcaag
taccgctgtaatgaaccctattatcgcctgctcaacaccccaggaaaaggtatctacacc
tgctcatctgggggttcttggaaggatgaagttaatcatgttgacattccaatgtgtctg
ccagtgtgtggaaagccagaccacccagtcgtggaagtccagcgaattattggtgggaag
gatgccccacgaggcagtttcccatggcaagctatgactgtcatcactgggcgagcagga
ggggcactgctgggcgatcgctggatcctaacagctgcccacgtcgtgtacccaaaaggg
aaagggaatgacaccgagatgctgacgcctgtacaggtggcagagaaggccgaaatcttc
ctgggtcacacagatgtgactgaactgtacaaagaaggcaataaaccagttctcagactc
tttgtgcacccagactacaatccaaatgatgagcataactttgatggagacattgcactc
attgagttgagggatccggtgacccttggccccgacacgctgcctatctgcctccctgag
tcagacaacaccacctattaccatacaggttggatggggtacgccagtggctttggggta
gaaaaaaacatccttgctagcaggctgaaatacgcccccatcccagtgggcaaccaggat
ttgtgtcggaagtggttgaggggaaagaagatatcgcagaaggacccagtcttctcagac
aacatgttttgtgctggtaccccccatggaggaaaagacacctgtcagggtgacagtgga
ggggccttagctgtgcgtgacccagagactcagcgttgggtggccacaggcattgtttct
tgggggcttgagtgtggcaaaggatatggcttttataccaaaatcatcaattacttggat
tggatcaagggcattgttgggaacgattgggtgtccatgcaggtttctcattag
DBGET
integrated database retrieval system
