Trachemys scripta elegans (red-eared slider): 117881396
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Entry
117881396 CDS
T07347
Symbol
SCP2
Name
(RefSeq) non-specific lipid-transfer protein isoform X1
KO
K08764
sterol carrier protein 2 [EC:
2.3.1.176
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00120
Primary bile acid biosynthesis
tst01040
Biosynthesis of unsaturated fatty acids
tst01100
Metabolic pathways
tst01212
Fatty acid metabolism
tst03320
PPAR signaling pathway
tst04146
Peroxisome
Module
tst_M00861
beta-Oxidation, peroxisome, VLCFA
tst_M00862
beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09103 Lipid metabolism
00120 Primary bile acid biosynthesis
117881396 (SCP2)
01040 Biosynthesis of unsaturated fatty acids
117881396 (SCP2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117881396 (SCP2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117881396 (SCP2)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.176 propanoyl-CoA C-acyltransferase
117881396 (SCP2)
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Gene cluster
GFIT
Motif
Pfam:
Thiolase_C_1
SCP2
Thiolase_N
Thiolase_C
Alkyl_sulf_C
ACP_syn_III
ketoacyl-synt
Ketoacyl-synt_C
SpoVAD
WSS_VP
SCP2_2
Motif
Other DBs
NCBI-GeneID:
117881396
NCBI-ProteinID:
XP_034634489
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All DBs
Position
8:complement(97935694..97992740)
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AA seq
538 aa
AA seq
DB search
MAPFDRRVFVVGVGMTKFEKPGVREDWDYPDMAKEAGQKALADAGVPYSAVEQACVGYVY
GDSTCGQRAIYHSLGLTGIPIINVNNNCSTGSTALFMARQVIQGGLANCALALGFEKMER
GSLEVKFPDRTNPIDKHMEVMINKYGLSAAPGAPQLFGNAGKEHMEKYGTKQEHFAKIAW
KNHSHSTNNPFSQFQKKYSLDEVLQSRKIYDFLTLLQCCPTSDGAAAVVLANEEFVRKHG
LESKAVEIVAQEMVTDLSSTFEENSCIKAVGYDMSKEAAKRCFSKAGLKPTDVDVIELHD
CFSSNELITYEALGLCPEGRAGELIDRGDNTYGGKWVVNPSGGLISKGHPLGATGLAQCA
ELCWQLRGEAGKRQVPGAKVALQHNIGLGGAVVVTLYRMGFPEAVRSQRIQAIPTRATVD
GFKAHLVFKEIEKKLEEEGEHFVKKIGGIFAFKVKDGPDGKEATWIVDVKNGKGSVDINS
DKKADCIITMADSDLLDLMTGKINPQTAFFQGKLKISGNMGMAMKLQSLQLQPGKAKL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggccccgttcgacaggagagtgtttgtggtgggagtcgggatgaccaagtttgaaaag
cctggtgtgcgggaagattgggattaccctgacatggctaaggaggcaggtcagaaggct
ttagctgatgcaggtgttccttactcagcagtggagcaggcatgtgtgggctatgtttat
ggtgactcaacatgtggtcaacgggctatctaccacagtttgggattaactggcattcct
atcattaatgttaacaacaactgttccactggatccactgctttgttcatggcccggcaa
gtgatccagggaggtttggcaaattgtgctttggctcttggctttgagaagatggaaagg
gggtcccttgaagttaaattcccagacaggacaaatccaatagataaacatatggaagtg
atgataaacaaatatggcttgtctgcagctccaggagcaccacagttgtttggaaatgct
ggaaaagaacatatggaaaaatatgggacaaaacaagaacactttgcaaaaattgcctgg
aagaatcatagccattcaactaacaacccgttttcccagttccaaaagaagtacagttta
gatgaagtgttgcagtctcgcaaaatttatgattttttgactctcttacagtgctgccca
acatctgatggagctgcagctgttgttttagctaatgaagagtttgtgagaaaacatgga
ttggagtcaaaagcagtggaaattgtggcccaagagatggtcactgatctttcaagtaca
tttgaggagaatagttgtattaaggcggttggctatgatatgagtaaagaagctgcgaaa
agatgtttttccaaagcaggtctgaaacctacagatgtggatgtgattgaactccatgat
tgtttctcatctaatgagctcattacttatgaagctttaggactttgtccggaaggaaga
gctggggagctgattgatagaggagacaatacttatggtggaaaatgggtggtaaacccc
agtggtggtttgatttctaaaggacatccattgggtgccacaggtctggctcagtgtgct
gaactctgctggcagctaagaggggaagctgggaagagacaagttcctggtgcaaaggtt
gctctgcaacataacataggtcttggtggtgctgtagttgtaacattatacagaatgggt
tttcctgaagctgtacgcagccagcgcatccaggctattcccaccagagcaactgttgat
ggatttaaggcccatcttgtcttcaaagagattgaaaagaaacttgaagaggaaggagaa
cattttgtcaagaaaattggtggtatctttgccttcaaagtaaaagatggtcctgatggt
aaagaagcaacctggatagtagatgtgaaaaatggtaaaggctctgtagatattaattca
gataagaaagctgactgtataattacaatggctgattctgacttgttggatttaatgacg
ggcaaaataaatccacagacagctttctttcaaggtaaattgaagatttctgggaacatg
ggcatggctatgaagcttcagagcctacagcttcagccaggcaaagctaaactttga
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