Trachemys scripta elegans (red-eared slider): 117885626
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Entry
117885626 CDS
T07347
Symbol
C1R
Name
(RefSeq) complement C1r subcomponent
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117885626 (C1R)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117885626 (C1R)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117885626 (C1R)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
117885626 (C1R)
Peptidases and inhibitors [BR:
tst01002
]
Serine peptidases
Family S1: chymotrypsin family
117885626 (C1R)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Phagocytosis
Opsonins
117885626 (C1R)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Trypsin
Sushi
FXa_inhibition
cEGF
EGF_CA
CDCP1_CUB_6
hEGF
CUB_2
EGF
EGF_3
Peptidase_S6
Motif
Other DBs
NCBI-GeneID:
117885626
NCBI-ProteinID:
XP_034642829
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All DBs
Position
1:138778121..138786799
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AA seq
715 aa
AA seq
DB search
MLPLLLLWGSLLFGVVSSSPTPRKLFGEITSPNYPKPYPNNNISTWDITVPKGFVVKLNF
WQFDLEPSESCLYDYVKITADKKDLGRYCGQLGSATGNHPGVREFVSKGNRMRMMFHSDF
SNEENSTLIPYKGFLAYYQAVDLDECAHGNALEEYEGPLCQHLCHNYVGGYICSCRPGYQ
LQSDHHSCRVECSSELFIETSGYLLSPEYPLPYPAELRCNYSIRLDRGLAITLKFLEPFD
IDDHQQVHCPYDQLKIQARGREIGEFCGKVSPGSIETNSNAVDVLFFTDESGFSHGWRIH
YSSERIRCPQPVPRDQFTLIKDLQPLYRFRDYFIVSCQTGYELMEGDQKLASFTAVCQDD
GTWHRPMPRCKIVSCGDPKKLTNGAFNYVSEHGNNYYQSVITYRCKEPYYRIVTNSGSDT
YNCSAHGSWADQDGHEDIPVCLPVCGKPDKPITGIQRIIGGSTAPPGSFPWQAKTHIFGL
GGGALLGDRWILTAAHTIYPKKDSSVTETETGGRMSLAEVAKKIEVFLGHTEVNKIHELG
NHPVRNVSVHPNYDPDDENNFNGDIALIELQDPVPLGPNLLPICLPDASNSTFYANGYMG
YVSGFGVEKNVLADRLKYVSLPMGDERSCKKWLQGKEVNGKPMVFSENMFCAGSPSVGKD
TCQGDSGSVFTVQDSESERWIATGIVSWGIGCHKSYGFYTKVINYLDWIKDITGM
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgctccccctgctcctcctgtgggggtctcttctctttggagtggtcagttccagccca
accccaaggaagctttttggggagatcacatcccccaattaccccaagccataccccaac
aacaacatcagcacctgggacattacagtcccaaagggttttgtggtgaagttgaacttc
tggcagttcgacctggagccatctgagtcctgcctctatgactacgtcaagatcacagca
gataagaaagacctgggccggtactgtggccagctaggctcagccacaggcaaccaccca
ggagtcagggagtttgtgtccaaagggaaccggatgaggatgatgttccactctgatttc
tccaacgaagagaacagcacccttatcccctacaagggcttcctagcctattaccaagct
gtggatctggatgagtgtgcccatggcaacgccctggaggaatacgaggggcctctgtgc
cagcacctctgccacaactatgtgggtggctacatctgctcctgccgccccggttaccag
ctgcagagcgaccaccattcttgccgagtggagtgcagcagtgagctgttcatagagacc
tctgggtacctgttgagcccagagtaccccctgccctaccctgcggagctgcggtgcaac
tatagcatccgcctggacagggggctggccatcaccctcaagttcctggagcccttcgat
atcgatgatcaccagcaggtccactgtccctatgaccagctcaagatccaagcacgcggg
agagagattggtgagttctgtggcaaggtgtcgcctggcagcattgaaaccaacagcaat
gcggtggatgtgctgttcttcacagatgagtcagggttcagtcacgggtggaggatccac
tacagctcagagagaatccggtgcccacagcctgtgccaagggaccagttcaccctcatc
aaagacctgcagcccctataccgatttcgtgactacttcatcgtcagctgccagactggg
tatgaactgatggagggtgaccagaagttggcatccttcaccgctgtctgccaggatgat
gggacttggcaccgacccatgccccggtgtaaaattgtgagctgtggtgaccccaaaaag
ctcaccaacggggccttcaattatgttagcgaacacgggaacaactactaccagtcagtg
atcacctaccggtgcaaggagccttattaccgcatagtcaccaacagcgggagcgataca
tacaactgctccgctcatggctcctgggcagaccaagacggccatgaggacatcccagtg
tgtttaccagtgtgtgggaagccagacaaacccatcactggaatccagcggatcatcggt
ggcagcacagcaccgccgggaagcttcccatggcaggcgaagacacacatctttgggctc
gggggtggggcgctgctgggtgaccgctggatcctgacagctgctcacaccatctacccc
aagaaagacagctcagtgacagagacagagacaggtgggaggatgagccttgctgaggtg
gctaagaagatcgaagtgttccttggccacacggaggtgaataagatccatgagctgggt
aaccaccctgtccgcaacgtgtccgtgcatcccaactacgaccctgatgatgagaacaac
ttcaatggggacattgcactgatcgagctgcaggacccagtgccactgggccccaacctg
ctgcccatctgcctcccagatgctagtaacagcactttctatgccaatggctacatgggc
tacgtgagcggctttggggtggagaaaaacgttctcgcagatcggctgaagtatgtatca
ctgccaatgggtgacgagagatcttgcaagaaatggctgcagggaaaggaggtcaatggg
aagcccatggtgttctctgagaacatgttctgtgctggctcgcccagtgtggggaaagat
acctgccagggggacagtgggagtgtcttcactgtgcaggattcagagagcgagcgctgg
atagccaccgggattgtctcctggggcatcggctgtcacaagagctatggcttctacacc
aaggtcatcaactacctggactggatcaaagatataacagggatgtag
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