Trachemys scripta elegans (red-eared slider): 117888546
Help
Entry
117888546 CDS
T07347
Symbol
ADAR
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04622
RIG-I-like receptor signaling pathway
tst04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117888546 (ADAR)
04623 Cytosolic DNA-sensing pathway
117888546 (ADAR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117888546 (ADAR)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
117888546 (ADAR)
Spliceosome [BR:
tst03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117888546 (ADAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
TrmB
FaeA
HTH_9
Motif
Other DBs
NCBI-GeneID:
117888546
NCBI-ProteinID:
XP_034647942
LinkDB
All DBs
Position
16:9860769..9882642
Genome browser
AA seq
1176 aa
AA seq
DB search
MNTGFGRGKGSYQTHPKHSYCSPNPAFFNNSLIPQGNNRDRFRNQQVQFLLGQITEAPLY
PFWEQRPQVEQHIRGPRAAVPIPRGSGHNSWGTTAGRFRPPYISQQTQSLPSYSPTQYNY
RKSEREFDHFNLSFQRLTVAGQNREQEILTILGQLRQGESCTGRELAHKLKTRKKEVNHY
LYKLLQEGKLHKEGETPPFWRIADKSGSVGAVCEGSATTDGSRCKDTASESQEKESPTVG
SEDSTESPIMAEVKEKICNYLFNVTDSTAYNLAKNIGFSKAKDVNTTLSALEKLGEVHKE
NTNPPKWSLTEKKRERMQIKLKANEVTEMAPPAPEPEFPAACIEPDPQESVLPLTEVKME
EEENVKNGQQAPEQTEQTDASAPDPGLRVRKPRYRFMNYDNSENGKWATDDIPDDLNAIN
KQADELRCIMESPSSPSYAAQFDTAFQCTPLEKLIACQEKNPVSGLIEYSQYTYQRCEFA
LLEQSGPSHEPRFKFQAVINGRRFPPAEAGSKKLAKQEAAANAMKILMREAETEGEDGME
GEESFIPDSSEAELPARPEPEPPSAAAQLNLSSGKNPISILMEYGQKSGSTCEFQLLSQE
GPPHDPKFKYCVKVGEQTFPAVIANSKKGAKQMAAEVAVKILRGEAGGQFFPEQPSVEVP
SEPTLEPPVAQPLNPDESKAAKAKGIGELIKYLNANPVSGLLEYARSNGFAAEFKMIDQT
GPPHDPKFVYQAKVGGRWFPAVTAHNKKQGKQEAADAALRVLIGETEKAERTEGLSIAEL
PVSGSTLHDQIAMLSHQRFNALTARIQHSLLGRKILAAIIMRRGEEGLGVVVSIGTGNRC
VKGEELSLKGETVNDCHAEIISRRGFVRFLYSELMKYNPADPSSTEQSIFESAGENRLKI
KDDVTFHLYVSTAPCGDGALFDKSCSDQASTAGQSQHQPLFENPKQGKLRTKVENGEGTI
PVESSDIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLSHFMQPVYLSSVTLGYLF
SQGHLTRAICCRMSRDGSTFEAGLQAPYRVKHPEVGRVSVYDSARQTGKTKESSVNWCLA
DESEVEVLDGTKGKVDGPKLEVSRVSKRSMFALFQQLCAKADRKDLQSLALYSDAKEAAG
AYQGAKRHFFRALEEMSYGSWICKPQEEENFSLAEA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaggttttggtcgaggcaaaggctcttatcaaacacacccaaaacatagctac
tgcagtcctaatccagccttttttaacaactctctcatcccacagggaaataatcgcgac
agattcagaaaccagcaggtacagttcctattgggacaaatcactgaagctcccctgtac
ccattttgggaacagaggccacaagtagagcaacacatcaggggtccgcgagctgctgta
ccaattcctagagggagtgggcacaacagctggggcacaacagctgggagatttaggccc
ccctatatcagtcagcaaacgcaaagtttaccgtcttattccccaactcagtacaactac
agaaaatcagaaagggaatttgaccatttcaacctgagtttccagagactgactgttgct
gggcaaaacagggagcaagaaattctgacaattttagggcagctcaggcagggggagtcc
tgtacaggtcgtgaactcgcccataaacttaaaacccgaaagaaagaagtcaatcattat
ctgtacaaacttctccaggaaggtaaattgcataaagaaggagagaccccccccttctgg
cggattgcggacaaatctggctctgtaggggcagtgtgcgaaggaagtgccaccaccgac
gggagtcgttgcaaagacacagcttctgagagtcaagaaaaggaaagccccactgtcggc
tcagaagacagtaccgagtctcccatcatggctgaagtcaaggagaaaatctgtaactat
ttgttcaatgtcacagactccacagcatacaaccttgcaaaaaacattggtttttcaaag
gccaaggatgttaacaccactctcagtgccctggaaaaactgggagaagtccacaaggag
aacacaaaccccccaaaatggtccctcactgaaaagaaacgggagcggatgcagatcaag
ttaaaagccaatgaagtaacggaaatggcacctcccgccccagagccagagtttccagct
gcctgcatagagccggatccgcaggagagtgtgttgcccctcacagaggtaaagatggaa
gaagaagaaaacgtaaagaatggacagcaagcccctgagcaaaccgaacagactgacgcc
agtgcccctgacccaggcctgcgggtccggaagcccagataccgcttcatgaactatgac
aactctgaaaatggcaagtgggccaccgatgacattccagatgacttgaatgccatcaat
aagcaggcggatgagttgagatgcatcatggaatccccctcatctcccagctacgctgcc
cagtttgatacggctttccagtgtacgcccttagaaaagctgattgcctgtcaggagaag
aatccggtcagcggcctcatcgaatatagccagtacacttaccagcgctgtgaatttgcc
cttttggagcagagcggaccctcgcatgaaccacgatttaagttccaggccgtgataaac
gggcgccggttcccaccagcggaagcaggtagcaaaaaactggccaagcaggaggcagct
gccaacgccatgaaaatcctgatgcgcgaagctgagaccgaaggggaggatggcatggaa
ggggaggaatcattcatcccagacagctccgaagcagagttgcctgcacgcccagaacca
gagcctccatctgcagcggcacagctaaacttgtcttccgggaagaaccccatcagcata
ttaatggaatatggacagaaatcagggagcacatgtgaattccagctgctgtctcaggag
ggaccaccccatgaccccaagttcaaatactgcgtgaaggtgggtgagcagacattccct
gcggtgatagccaacagcaagaagggagcaaagcagatggcagctgaggttgctgtgaag
atcctccgtggggaggctggggggcagttcttcccagaacagccctccgtagaggtccca
agcgagcccaccctggagccgcctgttgcccagcccctgaatccggatgagtcaaaggca
gcaaaagccaagggcatcggggagctgatcaaatacctcaatgccaatcccgtcagtggc
ctgctggaatacgcccgttccaacgggtttgcagcagagttcaaaatgatcgatcagacg
ggaccacctcacgatccgaagtttgtctaccaggccaaggtgggaggccgctggttccca
gccgtgactgcacacaacaaaaagcaaggcaagcaggaagcggccgacgcagcgctcaga
gtcctgattggggaaacagagaaggctgagcgcaccgaaggactgagcatcgcagagctc
cctgtgagcggcagtaccctgcatgatcagatagctatgctcagccaccagcgcttcaat
gccctcactgctcgcatccagcacagcctgctcggacggaagatcctggctgcaatcatc
atgaggcgaggagaagagggcctgggagttgtggtcagcattggcacgggtaatcgctgc
gtgaagggggaggagctgagcctgaagggcgagactgtgaatgactgccatgcagaaatc
atttcccgacgaggcttcgtgaggtttctctacagcgagctgatgaagtacaatcccgcc
gatccctcctccacagaacagagcatatttgagtcagcaggagaaaacaggctcaaaata
aaagacgacgttacctttcacctctacgtcagcacggcgccgtgtggagacggggccctc
ttcgataaatcctgcagtgaccaggcaagcacagcggggcagagccagcatcagcctctc
tttgagaatcccaagcagggtaaactgcgcaccaaggtggagaatggggaaggcaccatt
cccgtggagtcgagtgacattgtgcccacgtgggatgggatccagcatggggagaggctg
cgcaccatgtcctgcagcgacaaaatcctgcgctggaatgtgcttggcctgcagggggcg
ctgctgtcgcatttcatgcagccagtgtacctcagctccgttacgctcggttacctattc
agccagggtcacctgacacgtgcaatctgctgccgcatgtcgagagacgggagcacgttt
gaagcaggtctccaggctccgtatcgtgttaaacatcccgaggtggggagagttagcgtg
tacgactccgccaggcagacgggcaagaccaaggagtcgagtgtgaactggtgtcttgcc
gacgaaagcgaggtggaagtcctggatggcacaaaaggcaaagtagacggaccaaagcta
gaggtgtcccgcgtgtccaagaggagcatgttcgctctgttccagcagctctgtgccaag
gctgaccgcaaagacctgcagagccttgcgctgtactcagatgccaaggaggcagccggg
gcctaccagggagccaagcggcacttcttcagggcgctggaggagatgagctatgggagt
tggatctgcaaaccccaggaagaggagaacttctctctcgccgaggcgtaa
DBGET
integrated database retrieval system
