Candidatus Thiodictyon syntrophicum: THSYN_19980
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Entry
THSYN_19980 CDS
T05211
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy01501
beta-Lactam resistance
tsy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
THSYN_19980
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
THSYN_19980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsy02000
]
THSYN_19980
01504 Antimicrobial resistance genes [BR:
tsy01504
]
THSYN_19980
Transporters [BR:
tsy02000
]
Other transporters
Pores ion channels [TC:
1
]
THSYN_19980
Antimicrobial resistance genes [BR:
tsy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
THSYN_19980
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
THSYN_19980
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
THSYN_19980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AUB84854
UniProt:
A0A2K8UGZ2
LinkDB
All DBs
Position
complement(4782089..4783546)
Genome browser
AA seq
485 aa
AA seq
DB search
MTKALGMYPLMRTLALGAAALTAACNLGPEYVRPSAQVPAAYKADANWKPATPQDQAPRG
PWWEVFGDPPLTALVVQVEVSNQDLAAAAAKLREAQTLVQQARAGLFPSLSGSASVIRSQ
STIGSGSVPVSVGRRAPETTENIGLSLPWEIDLWGKVARQVESSRASAQASAADLESVRL
SAQATLAQDYFLLRVLDAQQRLLNETVAAYERALTITQNRYAAGVVAQVDVALAQAQLKT
TQAQAIDLGVRRAQLEHAIAVLIGRPPADLALAPADPPTSLPVIPAGLPSTLLERRPDIA
SAERRVAAANAQIGVARAAYFPTLSLSATLGYQSTDFSKLLSAGTRYWSVGPTLAGPLFD
AGLRRAQSAQAVAAYDASVAAYRQSVLVALREVEDNLSALHILAQEALAQEAAVEASRRA
AQLSLNQYKAGTVSYLNVVTAQAAQLANARTALDILGRRLTASVGLIKALGGGWEGTSAS
PTARR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagccttgggcatgtatccgctgatgcggaccctggcgctcggcgcggcggcc
ctgacggcggcctgcaacctggggccggagtacgtgcgcccgagcgcgcaggtcccggcc
gcctataaggcggacgccaactggaagcccgccacgccccaggaccaagcgccgcggggg
ccctggtgggaggtcttcggcgacccgccgctcactgcgctcgtggtccaggtcgaggtc
tccaaccaggacctggccgccgccgcggccaagctgcgcgaggcccagacgctggtgcag
caggcccgcgccgggctcttccccagcctctccggcagtgcctcggtgatccgctcccag
tccaccatcggcagcgggagcgtgccggtctcggtgggccgccgcgccccggagaccacc
gagaacatcgggctcagcctgccctgggagatcgacctctggggcaaggtggcgcgtcag
gtcgaatccagccgggcgagcgcgcaggcgagcgcggccgacctggagtcggtgcgcctg
agcgcccaggcgaccctggcccaggactatttcctgctgcgcgtcctggatgcccaacag
cggctgctcaacgaaaccgttgcggcctacgagcgggccctgacgattacccaaaaccgc
tacgcggccggggtcgtcgcccaggtcgacgtggcactggcgcaggcccaactgaagacg
acccaggcccaggccatcgacctgggggtccggcgcgcccagctcgagcacgccatcgcc
gtgctgatcggccggccgccggcggatttggcgctcgccccggcggacccgccgaccagc
ctgccggtcatccccgccggcctgccttcgaccctgctggagcgccggcccgacatcgcg
agtgccgagcgccgggtcgccgccgcgaacgcccagatcggggtcgcccgcgccgcctac
ttcccgaccctgagcctctctgccaccctgggttaccagagcaccgacttctccaagctg
ctctccgccggcacccgctattggtccgtgggtccgaccctggccgggccgctgttcgac
gccggtctgcgccgcgcccagagcgcccaggccgtcgccgcctatgacgccagcgtggcc
gcctaccgccagagcgtgctggttgccttgcgggaggtcgaggacaacctctcggcgctg
cacatcctcgcccaggaggcgctcgcccaggaggccgcggtcgaggccagccgccgcgcc
gcgcaattgagcctgaaccaatacaaggcgggcaccgtgagctatctgaacgtggtcacg
gcccaggccgcccaactcgccaacgcgcgcaccgccctggacatcctgggccggcgcctc
acggccagcgtgggcctgatcaaggccctgggcggcggttgggagggcacgtcggcgagt
cccacggcccgtcgctga
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