Tachysurus vachellii: 132846196
Help
Entry
132846196 CDS
T09596
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04622
RIG-I-like receptor signaling pathway
tvc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
132846196 (adar)
04623 Cytosolic DNA-sensing pathway
132846196 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132846196 (adar)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
132846196 (adar)
Spliceosome [BR:
tvc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132846196 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
Motif
Other DBs
NCBI-GeneID:
132846196
NCBI-ProteinID:
XP_060726790
LinkDB
All DBs
Position
5:26040141..26051255
Genome browser
AA seq
1345 aa
AA seq
DB search
MSRGNGGHPKEYQRFSLPSHQGKSSQGSFSQSLPPYPRAPHPPSPNGYLGRFQHPPPYSS
TGPPGPSQASPSLPPNPCTSRFPGPSQVQAQKSSSNRGACSDKAVDFHQQQILFLTGQVA
EAPRFVPHQFRHHRSPPQCSTEYYNSPKPSKYVRRGGYNHGRPSWQKGFNTRYHPGPKSA
WEQQHLRSQNNQYQCDSWVDCDAASLSSEFHALKLENFGTLSSSRSGSKATCSLPSGRYS
LQLNPDIQKQVHSSLASLQQGETLQARLLAKRLRLPKKIVNQALYALSKLNQAVRLEATP
PLWRLWKEGDTESTHGTRFRAKTDKNFAQDTFVRQNQGISEVLTGFTTTEACSDFSEESE
DSEKESSSEALDSDQASEKESCILTTMEAKDTKEHILRYLHETGQASALMIAKNLGFRNA
KHVNPTLYTMEKHGDLTRNTNFTLPTWELTSHQREKMERQRKAAVVASIIHDESELRGTP
GPVIATQPIPKIVCGSGLSEEVMTWENLPTSQTHISKDGTFGNGMLEKQSNSDMDCMPVL
EKIPSDDKDLASVPYTSHDASCYRANDKNGGHSEWASDDIPEFLNTIRSEVAVSLAAPLP
PAQNTEIVRLQKLRLALSKNPVSGLMEYAQYLGYSCEFLLLEQSGPSHNPRFRMQVMLDG
RRFPPAEASSKKVAKKVAAAETLRALQREMEGASSMEDEAEQPAVSLGEMNDFEDSFESS
EEPPKALARSLPGGKNPVSVLMEHSQRSGHAIEFINTGQEGPAHDPRFMFQVKVGDSLYP
EASAPSKKAARQLAAEEAVKGLMAEGQLQLNKPQYPFCPLGEGDLSPAMPPCPSLPPLTA
AELQAAHEAGVGDLINHLNNNAVSGLLEYARSRGFAAEIRLVGQSGLQHEPRFTYQAKLG
GRWFPAVCASTKKLGKQEAADAALRVLIGEAEKAARTGELTSELPVSGSTVHDQFAMLSH
QRFNALTARIQHSLLGRKILATIIMKRGADSLGTVVSLGTGNRCVKGEELSLKGDTVNDC
HAEIISRRGFIRFLYSELIKHWESPAEDNIFQVAEDGLLKIKDDITFHLYISTAPCGDGA
LFDKSCSELAEVTGSAHMPVFENAKQGKLRTKVENGEGTIPVESSAIVPTWDGIQHGERL
RTMSCSDKILRWNVLGLQGALLSHFMHPVYLQSITLGYLYNHAHLTRAVCCRLARDGSEI
VKSLPTHFRLCHPEVGRVSVYDSTRHTGKTKESSVNWSLPDKLKVEVLDGTKGKVDSPKL
EVSRVSKSNMFRLFRDVCRRAGRTDLLALTSYAHAKMAACSFQQAKEQFYKALSQLGYGT
WIGRPQEEKGFEAVETESQNVVSAL
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtaacggagggcaccccaaagagtaccagcgattttccctcccatcccat
cagggcaaatccagccaaggatccttctcccaatctttaccaccttaccccagagcccct
caccccccaagccccaacggttacttgggcaggttccagcatccccccccttactcatcc
actggccctcctggaccttcacaagctagtccttctttgcctccaaatccttgtacgtct
cgtttccctggaccttcccaagtgcaagctcagaagtcatcatcaaatagaggagcttgt
agtgacaaagcagtagactttcaccagcagcaaatcctgttccttacagggcaggttgct
gaggcgcccaggtttgtgccgcaccagttccgacaccacagaagtcctccccagtgttcc
acagaatattataattccccaaagcccagcaagtacgtgagaagagggggatataatcac
ggcaggccaagctggcagaaagggtttaacacaaggtaccatcctggacctaagtctgcc
tgggaacaacagcacttaagaagccagaataatcagtatcagtgtgacagctgggtggat
tgtgatgctgcctcactgtcttcagaatttcatgctttaaaactagagaactttggaaca
ctctcgtcatccagaagtgggagtaaggctacttgttcacttccctcaggtagatattcc
ttgcagctgaatcctgatatccaaaaacaagtccacagttctttggcctcattgcagcag
ggtgaaactctccaggccaggctcctggctaaaaggcttcgactgcctaagaaaattgtt
aaccaagctctatatgctttatccaaattaaaccaggcagtgaggttagaagcaactcct
cctctctggagactctggaaagaaggtgacactgaatcaacccacggaacccggttcaga
gccaaaactgataaaaactttgctcaagatacatttgtaaggcaaaaccagggtattagt
gaagtgctgacaggttttactactacagaggcctgtagtgatttcagtgaagaatctgaa
gactctgaaaaagaaagttcctctgaagctctagactctgaccaggcttctgaaaaagaa
tcttgtattttaacaacaatggaagcaaaagacaccaaggagcatatcctgcggtacctc
catgagactggccaagccagtgcattgatgattgccaaaaacctgggctttcgaaatgcc
aagcatgtaaatcctacactgtataccatggaaaagcacggcgacctaactcgcaacacg
aactttacgctccctacttgggagctgacttctcaccagcgtgagaagatggagagacag
cgaaaagcagctgttgttgcctctataatacatgacgagtcagagcttcgtggaacacca
ggcccagtgatagctacacaaccaatcccaaagattgtgtgtggatctgggttgtcagaa
gaagtgatgacgtgggagaacctcccaacaagtcagacacatatcagcaaggatggcaca
tttgggaacggaatgcttgagaagcagtcaaattcagatatggactgtatgcctgttctt
gaaaaaattccctcagatgacaaagaccttgcatctgttccctacacatcacatgatgct
tcatgttaccgggcaaatgacaagaatgggggacactcagagtgggcgtcggatgatatt
ccagaattcctgaacacaatccgatcagaagtggctgtgtccttggcggcacctcttcct
ccagcccagaatacagagatcgtcaggttgcagaagctaagactggcactcagcaagaac
ccggtcagtggcctgatggagtatgcacagtaccttggctacagttgtgaattcctgctg
cttgaacagtcaggaccctcacataaccccaggtttcgaatgcaagtgatgctcgatggg
cgtaggttcccaccagctgaagcctcaagcaagaaagtggcaaagaaagttgcagctgcg
gagactcttcgtgctctccagagagagatggaaggagcttctagtatggaagatgaagca
gagcagcctgcagtgtcattaggcgaaatgaatgattttgaggattcttttgagagttcc
gaggaacctccaaaggccttggctcgctcccttccaggtggcaagaatcctgtttctgtt
ctaatggagcacagccaacgtagtggccatgctattgagttcatcaatactggacaggag
ggtcctgcacatgacccacgcttcatgttccaagtgaaggttggggacagtctttacccg
gaggcatcggcacccagtaagaaggcagcacggcaactggcagcagaggaagctgtaaag
ggtcttatggcagaaggacaactacaactcaacaagccacagtacccgttttgtccactt
ggcgagggtgatttgtccccagcaatgcccccgtgcccatcactgcccccgctgacagca
gctgagctccaggcagcgcacgaggctggagtaggtgacctgatcaaccacttaaacaac
aacgctgtgtcaggcctgctggagtacgcacgctcacgaggctttgctgccgagatccgt
ctggtgggccagtcaggactccaacacgaaccacgttttacatatcaggctaagctggga
ggacgttggtttcctgcggtgtgtgccagcactaaaaaactgggcaagcaggaggcggct
gacgcagctctccgagtgttgatcggagaggcagaaaaggccgcacgcaccggggaactc
acatcagagttgccggtgtcaggtagcacagtgcacgatcagtttgccatgctgagtcat
cagcgtttcaatgcgcttactgcacgcattcagcacagccttttgggtaggaaaatcctt
gccacgatcatcatgaagagaggtgctgacagtctgggcacagtggtcagccttgggaca
ggaaatcgatgcgtcaaaggagaggaactgagtcttaaaggtgataccgttaacgactgc
catgctgaaatcatttccagaagaggcttcatccgctttttgtacagtgagttgataaag
cattgggaaagtcccgctgaagacaacatatttcaggttgcagaggatggtttgctcaag
atcaaagatgatattacgttccatctgtacatcagcactgctccatgtggggacggtgca
ctcttcgataaatcgtgcagcgagttagcggaggtcactggctcggctcacatgcccgtg
ttcgagaatgctaaacagggcaagctcaggaccaaagttgaaaacggtgagggtaccatc
ccggtggaatcgagtgccatcgtgcccacttgggatggcatccaacatggcgagcgtctc
agaaccatgagctgtagcgacaagatcctgcgctggaacgtgctgggcctgcagggggct
ctgctcagccactttatgcaccctgtctaccttcagtccatcaccttggggtacctgtac
aaccacgctcatttgactcgagctgtgtgctgccggttggccagagatggcagcgagata
gttaaaagcttgcctactcacttcagactttgccaccctgaggtcggcagagtcagtgtg
tacgactcaacacgtcacacaggaaagaccaaagagtccagtgtgaactggagcctgcca
gacaagctcaaggtggaggtactggatggcaccaagggcaaagtggacagtccaaagcta
gaggtgtcccgcgtctccaagtccaacatgtttcgtcttttccgggacgtgtgcaggcgg
gccggtcggactgacctgctggcgctgacctcctacgcccatgccaagatggctgcctgt
tctttccagcaggccaaggagcagttctacaaggctctgagtcagctgggttatggaacc
tggatcggcagaccgcaggaagagaagggctttgaggcagtggagactgaatctcagaac
gtagtttcagctctgtaa
DBGET
integrated database retrieval system
