Trinickia violacea: FAZ95_31520
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Entry
FAZ95_31520 CDS
T09503
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
tvl
Trinickia violacea
Pathway
tvl01501
beta-Lactam resistance
tvl02024
Quorum sensing
Module
tvl_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
tvl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FAZ95_31520
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FAZ95_31520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvl02000
]
FAZ95_31520
01504 Antimicrobial resistance genes [BR:
tvl01504
]
FAZ95_31520
Transporters [BR:
tvl02000
]
Other transporters
Pores ion channels [TC:
1
]
FAZ95_31520
Antimicrobial resistance genes [BR:
tvl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FAZ95_31520
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
FAZ95_31520
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
FAZ95_31520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Tox-REase-5
CsoSCA_N
Motif
Other DBs
NCBI-ProteinID:
QCP53571
UniProt:
A0A4P8IYD4
LinkDB
All DBs
Position
2:complement(2088803..2090287)
Genome browser
AA seq
494 aa
AA seq
DB search
MRILSAPLARTTAVIGLVCALTTLSACSTLPPYTKPEVAVPDHYANAPQASAGWSVATPA
DDHPRGPWWTLFDDPELNRLEAQIDISNQSVKKAVAQLQAARAMVDYQHAGYSPTVTAGI
AQSRTRLSQNVLGHSLAGHTVPDYDVGVAASWEPDLFGRVKDATVNARDTAQATEADLQS
VRLSMASDLATDYFDLRSLDIQKKLLDDTVAAYAASLEIVQHQFAAGGIDESAVAEAQTQ
LESTRTQDTDIDVQRAQLQHAIATLIGVPASSFTLPASTASVTLPQIPAGLPSQLLERRP
DIAAAERRVAAANAQIGEAHAAFYPDLTLSASAGLESTFFAPWLTAPSLFWSIGSQLAGT
LFDGGRREATLKGATAQYDGTVADYRQTVLVAFQQVEDNLSALQTLASEADTQQRATAAA
QQALQLTMNRYQAGAVSYLDVVTSQTTALANERTSDQIEARRIDASVGLLKALGGGWQGL
TSHAASGQARASAS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcctgtccgctcccctcgcccgcacgacggctgtcatcggcctcgtctgcgcc
ttgaccaccctgtccgcttgctcgacgctgccgccctacacgaagcccgaggtcgccgtg
cccgatcactacgcgaacgcgccgcaagcgtcggcgggctggtcggtcgccacgcctgcc
gacgatcacccgcgcggcccgtggtggacgctgttcgacgatccggaactgaaccgcctc
gaagcgcagatcgacatctcgaaccagtcggtcaagaaggccgtcgcgcaactgcaggcc
gcgcgcgcgatggtcgactatcagcacgccggctactcgccgaccgtgacggccggcatc
gcccaatcgcgcacgcgcctttcacagaacgttctcgggcattcgctcgcgggccacacc
gtgcccgactacgacgtgggtgtcgccgcaagctgggagcccgatctgttcgggcgcgtc
aaggacgcgaccgtcaacgcgcgcgacaccgcgcaagcaaccgaagcggacctgcaatcg
gtgcgcctgtcgatggccagcgatctcgctaccgactacttcgacctgcgctcgctcgac
atccagaagaagctgctcgacgacaccgtcgccgcctacgcagcgtcgctcgagatcgtg
cagcaccaattcgctgcgggcgggatcgacgagtcggccgtcgccgaagcgcagacgcaa
ctcgaaagcacgcgcacgcaggacacggatatcgatgtccagcgcgcgcagttgcaacac
gcgatcgcgacgctgatcggcgtgccggcgtcatcattcacgctgcctgcaagcacagcc
tctgtcacgctgccgcagattcccgccggactgccttcgcaattgctcgaacggcgcccc
gacatcgccgccgccgagcgccgagtcgcagcggccaacgcgcagattggcgaagcgcat
gcggcgttttatcccgacttgacgctgtcggcgtcggccgggctcgaaagcacgttcttc
gcgccatggctcaccgcgccaagcctgttctggtcgatcggttcgcaactcgcgggcacg
ctgttcgacggcggccgccgcgaggcgacgctcaaaggcgcgaccgcgcaatacgacggc
accgtcgccgattatcgtcagaccgtgctcgtcgcatttcaacaggtcgaagacaacttg
tcggcgctgcaaacgctcgcgagcgaagccgatacgcagcagcgtgcgaccgccgccgcg
cagcaggcgctgcagctcacgatgaaccgctatcaggcgggcgccgtgagctatctcgac
gtggtcacctcgcagacgaccgcgctcgccaacgagcggacttccgatcagatcgaggca
cggagaatcgatgcgagtgtggggttgttgaaggcgctggggggtgggtggcagggactc
accagccacgcggcttctggccaagctcgcgcaagcgcctcttga
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