Thalassospira xiamenensis: TH3_14420
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Entry
TH3_14420 CDS
T03639
Name
(GenBank) NodT family RND efflux system outer membrane lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
txi
Thalassospira xiamenensis
Pathway
txi01501
beta-Lactam resistance
txi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
txi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TH3_14420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TH3_14420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
txi02000
]
TH3_14420
01504 Antimicrobial resistance genes [BR:
txi01504
]
TH3_14420
Transporters [BR:
txi02000
]
Other transporters
Pores ion channels [TC:
1
]
TH3_14420
Antimicrobial resistance genes [BR:
txi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TH3_14420
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
TH3_14420
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
TH3_14420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF1707
HepT-like_2
DUF2161
Motif
Other DBs
NCBI-ProteinID:
AJD52994
UniProt:
A0AB72UG29
LinkDB
All DBs
Position
complement(3152667..3154070)
Genome browser
AA seq
467 aa
AA seq
DB search
MSLAPAPDTPPLPVPQVWPGHLGSSTEGAYAGELAWQAYFTDPLLQRLIETALENNRDLR
LAALRVEEASAAFRIQRSDRFPAVGVGAQGGRARVPGDLNMSGRPQVGGEYRAEVGLSTW
ELDLWGRIRNLEDAALQRWLASDAARQAVHLALIAQVADGYLGLREIDERVAIARQTVAT
REESYRIFRRRVEVGSTSKLDLIQVQTLLNQAQTLLTRLEQARATQLHALALLVGADPGP
LPAKAPFDETTVLAELRAGLPSEILVSRPDIISAEHQLRAGDANIGAARAAFLPRIALTG
SLGTASSDLDGLFDSGSRAWTFMPTLSLPIFDGGRRRANLELSEVRRDIAVAGYEKTIQT
AFREVADALSAKYWLAEQLTIKRANLEAQNERARLAQLRYDNGSAAFLEVLDAQRDLLDA
GQQLVQARRALLSSQVALYAALGGGTLAATGQAQDATSTSASTPSTR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgctcctgctcctgataccccgccgctgccggtgccccaggtttggcctggt
catcttggatcgagcaccgagggtgcctacgcgggagaacttgcttggcaggcctacttc
acggaccctttgctgcaacgcctcatcgagaccgcgctggagaacaaccgcgatctgcgc
ctagccgcgctgcgggtcgaggaagccagcgcggcattccgcattcagcgctcggatcga
tttcctgccgtgggcgtgggtgcccagggtggacgcgcccgcgtccctggcgacctgaac
atgtcgggccggccgcaggtcggcggcgagtaccgggccgaggtgggtttgagcacctgg
gagctggatctgtggggccggatccgaaacttggaagacgccgccctgcaacgctggctg
gcttccgacgcggcccgccaggccgtccacctggcgctgatcgcccaggtggccgacggt
tatctgggcttgcgcgagatagacgaacgcgtggccatcgcgcggcaaaccgtcgcgacc
cgcgaggagtcctatcgcattttccggcgccgcgttgaagtcggctcgacctcgaagctg
gatctcattcaagtccagactttgctgaaccaggctcagacgctgctaacccggcttgag
caagcgcgcgccacgcaactgcacgcgctggcactgctggtaggcgccgatcctggtccg
ctgcccgccaaggcacccttcgatgaaacaacggtgctggccgaactccgggccgggctg
ccctcggagatcttggtcagtcgcccggacatcatttccgccgaacaccaattgcgtgcc
ggcgatgccaacatcggcgcagcccgtgcggcgtttttgccgcgcatcgcgctcaccggc
agcctcggcacggccagttccgatcttgacggcctgttcgattccggcagccgcgcttgg
accttcatgcctaccttgtcgctgcccatcttcgatggcgggcggcggcgcgcaaacctg
gaactgagcgaagtacgtcgtgacatcgccgttgccgggtacgaaaagaccattcaaacg
gcctttcgcgaggtggccgatgcgctgagcgccaagtactggctggctgagcagttgact
atcaagcgggccaatctggaagcgcagaacgaacgcgcacggctggcccagttgcgctac
gacaacggctcggccgctttcctggaagtgctggacgcccaacgcgatttgctggatgcc
ggtcaacagctggtacaggcgcgccgtgcgctgctgtccagccaggtggcgctgtatgcc
gcgctcggcggcggcaccctcgccgcaaccggccaggcgcaggatgcaacctcgacgtcc
gcttccaccccatcaacccgttaa
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