Ursus americanus (American black bear): 123792354
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Entry
123792354 CDS
T07931
Symbol
MMP1
Name
(RefSeq) interstitial collagenase
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
uar
Ursus americanus (American black bear)
Pathway
uar03320
PPAR signaling pathway
uar04657
IL-17 signaling pathway
uar04926
Relaxin signaling pathway
uar05171
Coronavirus disease - COVID-19
uar05200
Pathways in cancer
uar05219
Bladder cancer
uar05323
Rheumatoid arthritis
uar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
uar00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
123792354 (MMP1)
09152 Endocrine system
03320 PPAR signaling pathway
123792354 (MMP1)
04926 Relaxin signaling pathway
123792354 (MMP1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123792354 (MMP1)
09162 Cancer: specific types
05219 Bladder cancer
123792354 (MMP1)
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
123792354 (MMP1)
09163 Immune disease
05323 Rheumatoid arthritis
123792354 (MMP1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
123792354 (MMP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
uar01002
]
123792354 (MMP1)
Enzymes [BR:
uar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
123792354 (MMP1)
Peptidases and inhibitors [BR:
uar01002
]
Metallo peptidases
Family M10
123792354 (MMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Reprolysin_4
Peptidase_M66
DUF4953
Peptidase_M54
Metallopep
Motif
Other DBs
NCBI-GeneID:
123792354
NCBI-ProteinID:
XP_045653472
UniProt:
A0A452RS57
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MPSLPLLLLLLCGVGSLGFPAATPGAQDQDVRTVQKYLENYYNLKSDGKQIVRQRNSSLV
TEKLKQMQEFFGLKVTGKIDADTLNVMKQPRCGVPDVAQYVLTDRTLRWEHTHLTYRIEN
YTPDLPRADVDSAMEKAFRLWSNVSPLTFTKIFEGQADIMISFVWGDHYDNSPFDGPNGN
LAHAFPPGPNLGGDAHFDEDETWTNNYRNYNLYRVAAHELGHSLGLSHSTDIGALMYPNY
MYDGDVQLSQDDINAIQAIYGPSPNPVQPTGSQTPQVCDSNLVFDAITTVRGEVMFFKDR
FYMRQNPFYPEVELNFISTFWPDLPSGLQAAYEFAERDEIRFFKGDKYWAAQGQEMLYGY
PKDIYRSFGFPQTVKNIDAAVSDEETGKTYFFVAEKYWRYDEYKRSMDAGYPRAIATDFP
GIGLKVDAVFQKYGFFYIVHGTTQYKFDLQTKRILSIDRVNSWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccttcctctgctgctgctgctgctctgcggcgtggggtccctcggcttcccg
gcagccaccccgggagcacaggaccaggacgtgcggacggtgcagaaatacctggaaaac
tactacaatctgaagagcgatgggaagcagatcgtaaggcagaggaacagcagcttggtg
actgagaagctgaagcagatgcaggaattctttgggctgaaggtgaccgggaagatagat
gctgacaccctgaatgtgatgaagcagccccgatgtggagtgcccgacgtggctcagtac
gtcctcactgataggaccctccgatgggagcacacacacctcacctacaggattgaaaac
tacacgccagatttgccaagagcagacgtggacagtgccatggagaaagcctttcgactc
tggagtaacgtctcgcccctgaccttcaccaagatctttgagggtcaagcagacatcatg
atatcctttgtctggggagatcactacgacaattctccctttgatggacccaacggaaac
cttgctcatgcgtttccaccaggcccaaatcttggaggggatgctcatttcgatgaagat
gaaacatggaccaacaattacagaaattacaatctgtatcgtgtggcggcccacgaattg
ggtcattcccttggactttctcattctactgatattggggctctgatgtaccccaactac
atgtacgacggtgatgtccagctatctcaggacgacatcaatgccatccaggccatatat
ggaccttccccgaatccggtccagccaacaggctcccaaacaccacaggtgtgtgatagt
aacctagtctttgatgctatcactacagttcggggagaagtgatgttctttaaagacagg
ttctacatgcgccaaaaccccttctacccggaagttgagctcaatttcatttctactttc
tggccagacctgcccagtggacttcaggcagcttatgaatttgctgagagagacgaaatc
cggtttttcaaaggtgataagtactgggctgctcaggggcaggaaatgctgtacggatac
cccaaggacatctacagatccttcggcttccctcaaactgtgaagaacatcgatgctgct
gtttctgacgaagaaactgggaaaacctacttctttgttgctgaaaagtactggaggtat
gacgaatacaaacggtccatggacgcaggttatcccagagcgatagcaactgactttcct
gggattggccttaaagttgatgctgttttccagaaatatggctttttctatatcgttcat
ggaaccacacaatacaaatttgatcttcaaactaagagaattctgagtattgacagagtt
aacagttggttcaactgctga
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