KEGG   PATHWAY: umr04966
Entry
umr04966                    Pathway                                
Name
Collecting duct acid secretion - Ursus maritimus (polar bear)
Description
One of the important roles of the collecting duct segment of the kidney nephron is acid secretion. As daily food intake loads acid into the body, urinary acid excretion is essential, and urine pH can drop as low as 4.5. The alpha-intercalated cell of collecting duct is the main responsible for hydrogen secretion into the urine. The carbon dioxide, which is generated in the cells and enters from the blood, is changed to carbonic acid. This carbonic acid is divided into hydrogen ion and bicarbonate ion. Intracellular CA II catalyses the formation of these ions. The hydrogen ion is secreted into the lumen by the luminal H(+)-ATPase. The bicarbonate ion is transported to the blood side by the anion exchanger type 1. Hydrogen ion in the lumen is trapped by urinary buffers. These include ammonium and phosphate.
Class
Organismal Systems; Excretory system
Pathway map
umr04966  Collecting duct acid secretion
umr04966

Organism
Ursus maritimus (polar bear) [GN:umr]
Gene
103657517  ATP4B; potassium-transporting ATPase subunit beta [KO:K01543] [EC:7.2.2.19]
103657687  ATP6V1G3; V-type proton ATPase subunit G 3 [KO:K02152]
103660482  ATP6V1C2; V-type proton ATPase subunit C 2 [KO:K02148]
103661250  ATP6V0A2; V-type proton ATPase 116 kDa subunit a2 [KO:K02154]
103661399  ATP6V0D2; V-type proton ATPase subunit d 2 [KO:K02146]
103661462  CA2; carbonic anhydrase 2 isoform X1 [KO:K18245] [EC:4.2.1.1]
103661526  ATP6V1C1; V-type proton ATPase subunit C 1 isoform X1 [KO:K02148]
103664487  ATP6V0E1; V-type proton ATPase subunit e 1 [KO:K02153]
103665588  SLC4A1; band 3 anion transport protein isoform X2 [KO:K06573]
103668497  ATP6V0C; V-type proton ATPase 16 kDa proteolipid subunit [KO:K02155]
103668950  ATP6V0E2; V-type proton ATPase subunit e 2 [KO:K02153]
103669049  ATP6V0A4; V-type proton ATPase 116 kDa subunit a [KO:K02154]
103670393  ATP6V1G1; V-type proton ATPase subunit G 1 [KO:K02152]
103671228  ATP6V1E2; V-type proton ATPase subunit E 2 [KO:K02150]
103671376  ATP6V1B1; V-type proton ATPase subunit B, kidney isoform [KO:K02147]
103671988  ATP6V1D; V-type proton ATPase subunit D isoform X1 [KO:K02149]
103672574  ATP6V0A1; V-type proton ATPase 116 kDa subunit a1 isoform X1 [KO:K02154]
103673659  ATP6V0D1; V-type proton ATPase subunit d 1 [KO:K02146]
103675697  ATP6V1E1; V-type proton ATPase subunit E 1 [KO:K02150]
103676644  ATP6V1F; V-type proton ATPase subunit F [KO:K02151]
103676707  ATP6V1B2; V-type proton ATPase subunit B, brain isoform [KO:K02147]
103678812  ATP6V1A; V-type proton ATPase catalytic subunit A [KO:K02145] [EC:7.1.2.2]
103679266  SLC12A7; solute carrier family 12 member 7 [KO:K13627]
103679623  TCIRG1; V-type proton ATPase 116 kDa subunit a3 [KO:K02154]
103682324  ATP6V1G2; V-type proton ATPase subunit G 2 isoform X4 [KO:K02152]
103682508  ATP4A; potassium-transporting ATPase alpha chain 1 [KO:K01542] [EC:7.2.2.19]
Compound
C00001  H2O
C00011  CO2
C00014  Ammonia
C00080  H+
C00238  Potassium cation
C00288  HCO3-
C00698  Cl-
C01353  Carbonic acid
Reference
  Authors
Wagner CA, Kovacikova J, Stehberger PA, Winter C, Benabbas C, Mohebbi N
  Title
Renal acid-base transport: old and new players.
  Journal
Nephron Physiol 103:p1-6 (2006)
DOI:10.1159/000090217
Reference
  Authors
Wagner CA, Devuyst O, Bourgeois S, Mohebbi N
  Title
Regulated acid-base transport in the collecting duct.
  Journal
Pflugers Arch 458:137-56 (2009)
DOI:10.1007/s00424-009-0657-z
Reference
  Authors
Koeppen BM
  Title
The kidney and acid-base regulation.
  Journal
Adv Physiol Educ 33:275-81 (2009)
DOI:10.1152/advan.00054.2009
Reference
PMID:9550618
  Authors
Hayashi M
  Title
Physiology and pathophysiology of acid-base homeostasis in the kidney.
  Journal
Intern Med 37:221-5 (1998)
DOI:10.2169/internalmedicine.37.221
Reference
  Authors
Fry AC, Karet FE
  Title
Inherited renal acidoses.
  Journal
Physiology (Bethesda) 22:202-11 (2007)
DOI:10.1152/physiol.00044.2006
Reference
  Authors
Pereira PC, Miranda DM, Oliveira EA, Silva AC
  Title
Molecular pathophysiology of renal tubular acidosis.
  Journal
Curr Genomics 10:51-9 (2009)
DOI:10.2174/138920209787581262
Reference
  Authors
Rodriguez-Soriano J
  Title
New insights into the pathogenesis of renal tubular acidosis--from functional to molecular studies.
  Journal
Pediatr Nephrol 14:1121-36 (2000)
DOI:10.1007/s004670000407
Reference
  Authors
Alper SL
  Title
Genetic diseases of acid-base transporters.
  Journal
Annu Rev Physiol 64:899-923 (2002)
DOI:10.1146/annurev.physiol.64.092801.141759
Related
pathway
umr04530  Tight junction
KO pathway
ko04966   

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