Variovorax sp. EBFNA2: RZE79_21215
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Entry
RZE79_21215 CDS
T10564
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
vae Variovorax sp. EBFNA2
Pathway
vae01501
beta-Lactam resistance
vae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vae00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RZE79_21215
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RZE79_21215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vae02000
]
RZE79_21215
01504 Antimicrobial resistance genes [BR:
vae01504
]
RZE79_21215
Transporters [BR:
vae02000
]
Other transporters
Pores ion channels [TC:
1
]
RZE79_21215
Antimicrobial resistance genes [BR:
vae01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RZE79_21215
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RZE79_21215
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RZE79_21215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WPG35998
LinkDB
All DBs
Position
complement(4512961..4514460)
Genome browser
AA seq
499 aa
AA seq
DB search
MNASISSFGSSRRFFALSTLALAAVLAGCAVGPAYQLPASAAPAGWKEQPAADGWLPAAP
ADALDRGEWWKLFGDATLDELAGRVQVSNQNIAAAVANYTQAQALVREQRAGLFPSVSLD
GSGRRSGTVGGNASASPSNAFGATLGASWTPDVWGRLRETVNSAQANAQASEADLASARL
SAVGDLATNYFSLREADAEIVLLDETILGYQRAFEITSNRYAAGIAAQTDVLQAQTQLVN
AKADRVGLQRTRATLEHAIAMLVGVAPADFSLPPARWTPTVPGIPTGVPSTLLQRRPDIA
AAERAVAAANAQIGIARSAYYPNISLTASVGSNASRVKDLFGSANTLWGLGLSVAQVVFD
AGAISASVDAAKAGHEASVARYRQTVLAAFQTVEDQLTTGATLAQQEGLRREATAAADKT
EQQLLNRYRAGQVSYTEVVQAQAAALSARRALVQLQVNRQAAAIALIQAMGGGWQADWMG
DARPAGNSTSNNNAASRTP
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcctctatctcttcctttggttcttcacgccgcttcttcgcgctgagcacgctc
gcgctggccgccgtgctcgccggctgtgccgtcgggccggcctaccagctgcccgcatcc
gccgcgcccgccggctggaaggaacagcccgccgccgacggctggctgcccgccgcgccg
gccgacgcgctcgaccgcggcgagtggtggaagctcttcggcgacgccacgctcgacgaa
ctcgcggggcgcgtgcaggtgtcgaaccagaacatcgccgccgctgtcgccaactacaca
caggcccaggcgctggtgcgcgagcagcgcgcggggctgttcccgtcggtgtcgctcgac
ggcagcggcaggcgctcgggcaccgtgggcggcaacgcctcggccagcccgtcgaatgcc
ttcggcgccacgttgggcgcgagctggacgcccgacgtgtggggccgcctgcgcgaaacc
gtgaacagcgcgcaggccaacgcacaggccagcgaggccgacctggcctcggcgcggctg
tcggccgtcggcgacctggccaccaactacttctcgctgcgcgaggccgacgccgagatc
gtgctgctcgacgaaaccatcctcggctaccagcgcgccttcgagatcacgagcaaccgc
tatgccgccggcatcgccgcgcagaccgatgtgctgcaggcgcagacgcagctggtgaac
gccaaggccgatcgcgtgggcctgcagcgcacgcgcgccacgctggagcacgccatcgcg
atgctggtgggcgtggcgccggccgacttcagcctgccgcccgcgcgctggacgcccacg
gtgccaggcattccgaccggcgtgccctcgacgctgctgcagcgccggcccgacattgcg
gcggcggagcgcgcggtggccgcggccaatgcgcagatcggcatcgcgcgctcggcctac
tacccgaacatctcgctcacggcctcggtcggcagcaacgcaagccgcgtgaaagacctc
ttcggctcggccaacacgctgtgggggctgggcctgtcggtggcgcaggtggtgttcgat
gcgggggcgatcagcgccagcgtcgatgccgccaaggccggccacgaggccagcgtggcg
cgctaccggcagaccgtgctggccgcgttccagactgtcgaagaccagctgacgactggc
gccacgctggcgcagcaggaaggcctgcgccgcgaggccacggcagcggccgacaagacc
gagcagcagttgctcaaccgctatcgcgcggggcaggtgagctataccgaggtggtgcag
gcgcaggccgccgcactgagcgcgcggcgcgcgctcgtgcagcttcaggtcaatcgccag
gccgcggcaatcgcgctgatccaggccatgggcggcggctggcaggccgactggatgggc
gatgcccgcccggccggcaacagcacttcaaacaacaacgccgcttcccgcacgccgtaa
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